Pairwise Alignments

Query, 320 a.a., calcium/sodium antiporter from Methanococcus maripaludis S2

Subject, 319 a.a., CaCA family Na(+)/Ca(+) antiporter (RefSeq) from Shewanella loihica PV-4

 Score =  150 bits (379), Expect = 4e-41
 Identities = 93/293 (31%), Positives = 169/293 (57%), Gaps = 20/293 (6%)

Query: 8   YMIFGGI-LLAYGSDWFIEGSTRVAKHFNVSNFVIGATIVAFGTSLPEIVTSSGAALSGY 66
           +++  G+  L + +D F+ G+   A++  +   +IG TIVA G+S PE+  ++ A+L G 
Sbjct: 6   FLLIAGLGALVWSADKFVFGAAAFARNLGLPPMLIGLTIVAMGSSAPEMFVAATASLEGM 65

Query: 67  PGLAVGNAVGSCIANIGIILGISVLMYPLIIKKRAIIKNGNIYLIATILLVILGYNG-FS 125
              A+GN +GS +ANI +ILGI+ L+  + +  + + +   + L AT L     ++G  +
Sbjct: 66  TDTAIGNVLGSNVANITLILGITALLGAISVSSQTLKREIPMMLGATALAGYFLHDGQLT 125

Query: 126 RFDGLIL---FLFMITYVIY-TIKTSESD------DEEIISDLTTKKASIFIVVGLLAVI 175
           R +GL+L   F  ++ Y+I+  I   E D      + E+  D+ T KA +++V+GL+ + 
Sbjct: 126 RVEGLVLMALFFALMGYLIWHAIVNKEKDPLIDEAESEVPKDVPTPKAILWLVIGLVLLP 185

Query: 176 LGSDLFIEGAKGIAEYFNVPESIIGFSLVAFGTSLPELASSVAAAKRKLGSIVLGNVIGS 235
           L +D  ++GA GIA+ F++ + +IG +++A GTSLPELA+ VA   +K   + +GNV+GS
Sbjct: 186 LSADWMVQGAVGIAKAFHMSDLVIGLTIIAVGTSLPELAACVAGVLKKEDDLAIGNVVGS 245

Query: 236 NIANTCIALSFSAMI----VDIP----KYNVELMVNTIMALLIIFTMNREKIK 280
           N+ N    L+  A+I    VD       + + +  +  +A+LI+ T    +++
Sbjct: 246 NLFNILAVLALPALIAPGAVDAAASSRDFYMVMATSVALAILILLTGKARQLR 298



 Score = 79.0 bits (193), Expect = 1e-19
 Identities = 40/114 (35%), Positives = 66/114 (57%)

Query: 6   ISYMIFGGILLAYGSDWFIEGSTRVAKHFNVSNFVIGATIVAFGTSLPEIVTSSGAALSG 65
           I +++ G +LL   +DW ++G+  +AK F++S+ VIG TI+A GTSLPE+       L  
Sbjct: 174 ILWLVIGLVLLPLSADWMVQGAVGIAKAFHMSDLVIGLTIIAVGTSLPELAACVAGVLKK 233

Query: 66  YPGLAVGNAVGSCIANIGIILGISVLMYPLIIKKRAIIKNGNIYLIATILLVIL 119
              LA+GN VGS + NI  +L +  L+ P  +   A  ++  + +  ++ L IL
Sbjct: 234 EDDLAIGNVVGSNLFNILAVLALPALIAPGAVDAAASSRDFYMVMATSVALAIL 287