Pairwise Alignments

Query, 320 a.a., calcium/sodium antiporter from Methanococcus maripaludis S2

Subject, 328 a.a., putative Na+/Ca2+ exchanger protein, cation antiporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  171 bits (434), Expect = 2e-47
 Identities = 122/341 (35%), Positives = 184/341 (53%), Gaps = 48/341 (14%)

Query: 6   ISYMIFGGILLAYGSDWFIEGSTRVAKHFNVSNFVIGATIVAFGTSLPEIVTSSGAALSG 65
           I  +I G IL+  G++   +G+  VAK F + + VIG TIVAFGTS PE+  S  +AL G
Sbjct: 3   ILLLIGGLILILLGANGLTDGAASVAKRFRIPSIVIGLTIVAFGTSAPELTVSVASALKG 62

Query: 66  YPGLAVGNAVGSCIANIGIILGISVLMYPLIIKKRAIIKNGNIYLIATILLVILGYNGF- 124
              +A+GN VGS I N  +I+G + L  P+II +  + K   + ++++++L+I   + F 
Sbjct: 63  SADIAIGNVVGSNIFNTLMIVGCTALFAPIIITRNTLRKEIPLCILSSVVLLICANDIFL 122

Query: 125 --------SRFDGLILFLFMITYVIYTI-----KTSESDD---------EEIISDLTTKK 162
                   +R DGL+L  F   ++ YT      K+S + +         EE I  L+  K
Sbjct: 123 DNATENILNRVDGLLLLCFFAIFMGYTFAIAFPKSSAAPEPAAPEHTAPEEEIKLLSWWK 182

Query: 163 ASIFIVVGLLAVILGSDLFIEGAKGIAEYFNVPESIIGFSLVAFGTSLPELASSVAAAKR 222
           + ++I+ GL A+I G  LF+ GA GIA    V ESIIG +LVA GTSLPELA+S+ AA +
Sbjct: 183 SILYIIGGLAALIYGGQLFVNGATGIARSMGVSESIIGLTLVAGGTSLPELATSIVAALK 242

Query: 223 KLGSIVLGNVIGSNIANTCIALSFSAMIV-----DIPKYNVELMVNTIMALLIIFTMNRE 277
           K   + +GNVIGSN+ N    L  SA I       I  +++  +V + + LL +F +   
Sbjct: 243 KNPEMAIGNVIGSNLFNIFFVLGCSASITPLHLSGITNFDLFTLVGSSI-LLWLFGL--- 298

Query: 278 KIKKMLKFKNFRTDYFSK--IDRIDGISYILIYLIFLAYLL 316
                         +F+K  I RI+G   IL Y+ +   L+
Sbjct: 299 --------------FFAKRTITRIEGSIMILCYVAYTVVLI 325