Pairwise Alignments

Query, 426 a.a., phosphomethylpyrimidine synthase from Methanococcus maripaludis S2

Subject, 627 a.a., phosphomethylpyrimidine synthase ThiC from Pedobacter sp. GW460-11-11-14-LB5

 Score =  326 bits (835), Expect = 1e-93
 Identities = 186/464 (40%), Positives = 272/464 (58%), Gaps = 47/464 (10%)

Query: 1   MTQMTDAKSGITTEEMKFVAKEEGMDVETLKNLIA--------------------KGYV- 39
           ++QM  A+ GI T EM+++A  E   +E L   +                     KGY+ 
Sbjct: 135 VSQMHYARKGIITAEMEYIAIRENQQIELLNAQLGEQHEVMNHQHQGNSFGANTPKGYIT 194

Query: 40  -------------VIPKNVNR-NTKPVGIGDNLRTKVNVNLGTSPDFIDIACELKKVEIS 85
                        VIP N+N    +P+ IG N   K+N N+G S     I  E++K   +
Sbjct: 195 PEFVRAEVAAGRAVIPCNINHPELEPMIIGRNFLVKINANIGNSAVTSTIEEEVEKAVWA 254

Query: 86  NKYGADAIMDLSTGGNLPEIRKEIIKNTNLPIGTVPIYEVGVDAKEKY-GRVIDMDEDLI 144
            ++GAD IMDLSTG N+ E R+ II+N+ +PIGTVPIY+    A EK  G+  D+  ++ 
Sbjct: 255 CRWGADTIMDLSTGKNIHETREWIIRNSPVPIGTVPIYQ----ALEKVNGKAEDLTWEIF 310

Query: 145 FNVIERQAKEGVDFMTLHCGITKQTVSALNNDPRKMGVVSRGGAFLTAYIMYHDKENPLY 204
            + +  QA++GVD+ T+H G+  + V       R  G+VSRGG+ +  + + H KEN LY
Sbjct: 311 RDTLIEQAEQGVDYFTIHAGVLLRYVPL--TAKRITGIVSRGGSIMAKWCLAHHKENFLY 368

Query: 205 KEFDYLLELLKEHDVTLSLGDGMRPGCLQDNTDRAQIQELITLGELVDKCREKGVQVMVE 264
             F+ + E++K +DV  SLGDG+RPGC+ D  D AQ  EL TLGEL     +  VQ ++E
Sbjct: 369 THFEEICEIMKAYDVAFSLGDGLRPGCIADANDAAQFSELETLGELTKIAWKHDVQTIIE 428

Query: 265 GPGHVPYNNIEANMKIQKTLCKNAPFYVLGPIVTDLAPGYDHITAAIGGTLAAVSGANFL 324
           GPGHVP + I+ANM+ Q   C  APFY LGP+  D+APGYDHIT+AIG  +    G   L
Sbjct: 429 GPGHVPMHLIKANMEKQLEHCGEAPFYTLGPLTIDIAPGYDHITSAIGAAMIGWFGTAML 488

Query: 325 CYVTPAEHVRLMKEDDVKEGLIASKIAAQAADVAKGHPVAWKLEKEMADARIKHDWERQF 384
           CYVTP EH+ L  + DVK+G+I  KIAA AAD+AKGHP A   +  ++ AR +  WE QF
Sbjct: 489 CYVTPKEHLGLPNKKDVKDGVITYKIAAHAADLAKGHPGAQYRDNALSKARFEFRWEDQF 548

Query: 385 EIALDSNKPRKMREE-IPSKDEKA---CSVCG-DYCALLMVEEL 423
            ++LD +  ++  +E +P++  K    CS+CG ++C++ + +++
Sbjct: 549 NLSLDPDTAKEFHDETLPAEGAKIAHFCSMCGPNFCSMKITQDV 592