Pairwise Alignments

Query, 426 a.a., phosphomethylpyrimidine synthase from Methanococcus maripaludis S2

Subject, 683 a.a., thiamine biosynthesis protein ThiC (RefSeq) from Shewanella loihica PV-4

 Score =  330 bits (847), Expect = 6e-95
 Identities = 189/457 (41%), Positives = 267/457 (58%), Gaps = 40/457 (8%)

Query: 1   MTQMTDAKSGITTEEMKFVAKEEGMDVETL---------------------------KNL 33
           +TQM  A+ GI T EM++VA  E M  ET+                           +  
Sbjct: 143 VTQMHYARRGIITPEMEYVALRENMARETVTEEVLNQRAPGESFGAKLGEPITPEFVRQE 202

Query: 34  IAKGYVVIPKNVNR-NTKPVGIGDNLRTKVNVNLGTSPDFIDIACELKKVEISNKYGADA 92
           +A G  ++P N+N    +P+ IG N   KVN N+G S     I  E++K+  + ++GAD 
Sbjct: 203 LAAGRAILPLNINHPEAEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWATRWGADT 262

Query: 93  IMDLSTGGNLPEIRKEIIKNTNLPIGTVPIYEVGVDAKEKYGRVI-DMDEDLIFNVIERQ 151
           +MDLSTG  + E R+ II+N+ +PIGTVPIY+    A EK   +  D+  ++  + +  Q
Sbjct: 263 VMDLSTGRYIHETREWIIRNSPVPIGTVPIYQ----ALEKVNGIAEDLTWEIFRDTLIEQ 318

Query: 152 AKEGVDFMTLHCGITKQTVSALNNDPRKMGVVSRGGAFLTAYIMYHDKENPLYKEFDYLL 211
           A++GVD+ T+H G+  + V       R  G+VSRGG+ +  + + H KEN LY+ FD + 
Sbjct: 319 AEQGVDYFTIHAGVLLRYVPMTAK--RLTGIVSRGGSIMAKWCLSHHKENFLYEHFDEIC 376

Query: 212 ELLKEHDVTLSLGDGMRPGCLQDNTDRAQIQELITLGELVDKCREKGVQVMVEGPGHVPY 271
           +L   +DV+LSLGDGMRPG + D  D AQ  EL TLGELV K  +  VQ ++EGPGH+P 
Sbjct: 377 QLCAAYDVSLSLGDGMRPGSIADANDEAQFAELETLGELVKKAWQYDVQTIIEGPGHIPM 436

Query: 272 NNIEANMKIQKTLCKNAPFYVLGPIVTDLAPGYDHITAAIGGTLAAVSGANFLCYVTPAE 331
             I+ NM  Q  LC  APFY LGP  TD+APGYDH T+ IG  + A  G   LCYVTP E
Sbjct: 437 QLIKENMDKQLELCDEAPFYTLGPQTTDIAPGYDHFTSGIGAAMIAWYGCAMLCYVTPKE 496

Query: 332 HVRLMKEDDVKEGLIASKIAAQAADVAKGHPVAWKLEKEMADARIKHDWERQFEIALDSN 391
           H+ L  ++DVK+GLIA KIAA A DVAKGHP A   +  ++ AR +  WE Q+ + LD +
Sbjct: 497 HLGLPNKEDVKQGLIAYKIAAHAGDVAKGHPGAQIRDNALSKARFEFRWEDQYNLGLDPD 556

Query: 392 KPRKMREE-IPSKDEKA---CSVCG-DYCALLMVEEL 423
             R   +E +P +  K    CS+CG  +C++ + +E+
Sbjct: 557 TARAYHDESLPQESAKVAHFCSMCGPKFCSMKITQEV 593