Pairwise Alignments

Query, 426 a.a., phosphomethylpyrimidine synthase from Methanococcus maripaludis S2

Subject, 721 a.a., thiamin biosynthesis protein ThiC (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  322 bits (825), Expect = 2e-92
 Identities = 186/457 (40%), Positives = 267/457 (58%), Gaps = 40/457 (8%)

Query: 1   MTQMTDAKSGITTEEMKFVAKEEGMDV---------------------------ETLKNL 33
           ++Q+  A+ GI T EM++VA  E M +                           E +++ 
Sbjct: 164 VSQLHYARQGIITPEMEYVAIRENMALADVQDEILNRRGQGESFGAVIGKPITPEFVRDE 223

Query: 34  IAKGYVVIPKNVNR-NTKPVGIGDNLRTKVNVNLGTSPDFIDIACELKKVEISNKYGADA 92
           IA+G  +IP N+N    +P+ IG N   KVN N+G S     I  E++K+  S ++GAD 
Sbjct: 224 IARGRAIIPLNINHPEAEPMTIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADT 283

Query: 93  IMDLSTGGNLPEIRKEIIKNTNLPIGTVPIYEVGVDAKEKYGRVID-MDEDLIFNVIERQ 151
           +MDLSTG  + E R+ II+N+ +PIGTVPIY+    A EK   V + +  ++  + +  Q
Sbjct: 284 VMDLSTGRYIHETREWIIRNSPVPIGTVPIYQ----ALEKVNGVAEHLTWEVFRDTLIEQ 339

Query: 152 AKEGVDFMTLHCGITKQTVSALNNDPRKMGVVSRGGAFLTAYIMYHDKENPLYKEFDYLL 211
           A++GVD+ T+H G+  + V       R  G+VSRGG+ +  + + H +EN LY  F  + 
Sbjct: 340 AEQGVDYFTIHAGVLLRYVPM--TAKRVTGIVSRGGSIMAKWCLSHHQENFLYTHFREIC 397

Query: 212 ELLKEHDVTLSLGDGMRPGCLQDNTDRAQIQELITLGELVDKCREKGVQVMVEGPGHVPY 271
           EL   +DV+LSLGDGMRPG + D  D AQ  EL TLGELV+   E  VQ ++EGPGH+P 
Sbjct: 398 ELCVAYDVSLSLGDGMRPGSIADANDEAQFAELETLGELVNIAWEYDVQTIIEGPGHIPM 457

Query: 272 NNIEANMKIQKTLCKNAPFYVLGPIVTDLAPGYDHITAAIGGTLAAVSGANFLCYVTPAE 331
             I+ NM  Q   C  APFY LGP +TD+APGYDH T+ IG  + A  G   LCYVTP E
Sbjct: 458 QLIKENMDKQLIHCAEAPFYTLGPQITDIAPGYDHFTSGIGAAMIAWYGCAMLCYVTPKE 517

Query: 332 HVRLMKEDDVKEGLIASKIAAQAADVAKGHPVAWKLEKEMADARIKHDWERQFEIALDSN 391
           H+ L  + DVK+GLIA KIAA AAD+AKGHP A   +  ++ AR +  WE Q+ + LD +
Sbjct: 518 HLGLPNKQDVKQGLIAYKIAAHAADIAKGHPGAQIRDNALSKARFEFRWEDQYNLGLDPD 577

Query: 392 KPRKMREE-IPSKDEKA---CSVCG-DYCALLMVEEL 423
             R   +E +P +  K    CS+CG  +C++ + +++
Sbjct: 578 TARAYHDESLPQESAKVAHFCSMCGPKFCSMKITQDV 614