Pairwise Alignments

Query, 426 a.a., phosphomethylpyrimidine synthase from Methanococcus maripaludis S2

Subject, 565 a.a., thiamine biosynthesis protein ThiC (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  346 bits (888), Expect = e-100
 Identities = 188/439 (42%), Positives = 274/439 (62%), Gaps = 20/439 (4%)

Query: 1   MTQMTDAKSGITTEEMKFVAKEEGMDVETL-----------KNLIAKGYVVIPKNVNR-N 48
           +TQM  AK GI T EM++VA  E M+ E L           +  IA+G+ V+P N+N   
Sbjct: 127 ITQMAYAKRGIITPEMEYVAIRENMNCEELGIETHITPEFVRKEIAEGHAVLPANINHPE 186

Query: 49  TKPVGIGDNLRTKVNVNLGTSPDFIDIACELKKVEISNKYGADAIMDLSTGGNLPEIRKE 108
            +P+ IG N   K+N N+G S     I  E++K   S K+G D +MDLSTG N+ E R+ 
Sbjct: 187 AEPMIIGRNFLVKINTNIGNSATTSSIDEEVEKALWSCKWGGDTLMDLSTGENIHETREW 246

Query: 109 IIKNTNLPIGTVPIYEVGVDAKEKYGRVI-DMDEDLIFNVIERQAKEGVDFMTLHCGITK 167
           II+N  +P+GTVPIY+    A EK   V+ D++ ++  + +  Q ++GVD+ T+H GI +
Sbjct: 247 IIRNCPVPVGTVPIYQ----ALEKVNGVVEDLNWEIYRDTLIEQCEQGVDYFTIHAGIRR 302

Query: 168 QTVSALNNDPRKMGVVSRGGAFLTAYIMYHDKENPLYKEFDYLLELLKEHDVTLSLGDGM 227
             V     D R  G+VSRGG+ ++ + + HD+E+ LY+ FD + ++L ++DV +SLGDG+
Sbjct: 303 HNVHLA--DKRLCGIVSRGGSIMSKWCLVHDQESFLYEHFDDICDILAQYDVAVSLGDGL 360

Query: 228 RPGCLQDNTDRAQIQELITLGELVDKCREKGVQVMVEGPGHVPYNNIEANMKIQKTLCKN 287
           RPG + D  D AQ  EL T+GELV +  EK VQ  +EGPGHVP + I+ NM+ Q   C +
Sbjct: 361 RPGSIHDANDEAQFAELDTMGELVLRAWEKNVQAFIEGPGHVPMHKIKENMERQIEKCHD 420

Query: 288 APFYVLGPIVTDLAPGYDHITAAIGGTLAAVSGANFLCYVTPAEHVRLMKEDDVKEGLIA 347
           APFY LGP+VTD+APGYDHIT+AIG       G   LCYVTP EH+ L  ++DV+ G+I 
Sbjct: 421 APFYTLGPLVTDIAPGYDHITSAIGAAQIGWLGTAMLCYVTPKEHLALPDKEDVRVGVIT 480

Query: 348 SKIAAQAADVAKGHPVAWKLEKEMADARIKHDWERQFEIALDSNKPRKMREEIPSKDEKA 407
            KIAA AAD+AKGHP A   +  ++ AR +  W+ QF+++LD  + +         D + 
Sbjct: 481 YKIAAHAADLAKGHPGAQVRDNALSKARYEFRWKDQFDLSLDPERAQGYFRAGHHIDGEY 540

Query: 408 CSVCG-DYCALLMVEELGK 425
           C++CG ++CA+ +  +L K
Sbjct: 541 CTMCGPNFCAMRLSRDLKK 559