Pairwise Alignments

Query, 788 a.a., CDC48 family AAA ATPase from Methanococcus maripaludis S2

Subject, 608 a.a., Cell division protein FtsH (EC 3.4.24.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  208 bits (529), Expect = 8e-58
 Identities = 111/273 (40%), Positives = 169/273 (61%), Gaps = 4/273 (1%)

Query: 483 VGGLKEVEPSALREVLVEVPNIKWSDVGGLEDIKQDLKEAVEWPIKNKEMFERMGIRPPK 542
           +GGL  +  S  +  +     + ++DV G+++ K +L E V + +K+K  + R+G   PK
Sbjct: 132 MGGLMNIGKSRAKVFVERDTGVTFADVAGIDEAKVELVEIVSF-LKDKAKYARLGAHIPK 190

Query: 543 GVLLFGPPGTGKTLLAKAVANESEANFISVKGPEIFSKWVGESEKAIREIFRKARQAAPT 602
           G LL GPPGTGKTL+AKA+A E+   F S+ G E    +VG     + ++F +ARQAAP 
Sbjct: 191 GTLLVGPPGTGKTLVAKAIAGEAGVPFFSISGSEFVEMFVGVGAARVHDLFEQARQAAPC 250

Query: 603 VIFFDEIDSVAPKRGMD-FGSSGVTEKVVNQLLTELDGLEEPKDVVIIAATNRPDILDQA 661
           +IF DE+D++   RG+   G +   E+ +NQLL ELDG +  + VV++AATNRP++LD A
Sbjct: 251 IIFIDELDALGKMRGVGVLGGNDEKEQTLNQLLAELDGFDPREGVVLLAATNRPEVLDPA 310

Query: 662 LLRPGRLDRIVLVPIPNETARLEIFKVHTKGMPIGKDVNLEKLAKETKGYTGADIEAVCR 721
           LLR GR+DR +L+  P+   R  I KVH + +  G+D++ E++A  T G+TGAD+  +  
Sbjct: 311 LLRAGRIDRQILIDRPDRKGRQAILKVHLQKIVTGQDLDSERIADITTGFTGADLANLVN 370

Query: 722 EAAMIALRENINSEHVESRHFDGAFKRIAPSVK 754
           EAA+IA R    +E V    F  A +RI   ++
Sbjct: 371 EAAIIATRR--GAETVSLDDFTAAVERIVAGIE 401



 Score =  157 bits (397), Expect = 2e-42
 Identities = 84/211 (39%), Positives = 126/211 (59%), Gaps = 4/211 (1%)

Query: 174 VTYEDIGGLKEEVKKIREMVELPMRYPELFDKLGIEPPKGVLLAGPPGTGKTLLAKAVAN 233
           VT+ D+ G+ E   ++ E+V   ++    + +LG   PKG LL GPPGTGKTL+AKA+A 
Sbjct: 153 VTFADVAGIDEAKVELVEIVSF-LKDKAKYARLGAHIPKGTLLVGPPGTGKTLVAKAIAG 211

Query: 234 EAGANFYTINGPEIMSKYVGETEENLRKIFEEAEENSPSIIFIDEIDAVAPKRDE---AS 290
           EAG  F++I+G E +  +VG     +  +FE+A + +P IIFIDE+DA+   R       
Sbjct: 212 EAGVPFFSISGSEFVEMFVGVGAARVHDLFEQARQAAPCIIFIDELDALGKMRGVGVLGG 271

Query: 291 GEVERRMVAQLLTLMDGLESRGQLVILAATNRPDSIDMALRRPGRLDREITIGIPDRHGR 350
            + + + + QLL  +DG + R  +V+LAATNRP+ +D AL R GR+DR+I I  PDR GR
Sbjct: 272 NDEKEQTLNQLLAELDGFDPREGVVLLAATNRPEVLDPALLRAGRIDRQILIDRPDRKGR 331

Query: 351 NEILQIHTRNMPLQPDYEKSDVISILNELVG 381
             IL++H + +    D +   +  I     G
Sbjct: 332 QAILKVHLQKIVTGQDLDSERIADITTGFTG 362