Pairwise Alignments

Query, 788 a.a., CDC48 family AAA ATPase from Methanococcus maripaludis S2

Subject, 627 a.a., ATP-dependent metalloprotease FtsH from Dechlorosoma suillum PS

 Score =  207 bits (528), Expect = 1e-57
 Identities = 112/285 (39%), Positives = 171/285 (60%), Gaps = 20/285 (7%)

Query: 504 IKWSDVGGLEDIKQDLKEAVEWPIKNKEMFERMGIRPPKGVLLFGPPGTGKTLLAKAVAN 563
           + ++DV G ++ K+++ E V++ +++   F+++G R PKGVL+ G PGTGKTLLAKA+A 
Sbjct: 151 VTFADVAGCDEAKEEVSELVDF-LRDPSKFQKLGGRIPKGVLMVGNPGTGKTLLAKAIAG 209

Query: 564 ESEANFISVKGPEIFSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSVAPKRGMDFGSS 623
           E++  F S+ G +    +VG     +R++F  A++ AP +IF DEID+V  +RG   G  
Sbjct: 210 EAKVPFFSISGSDFVEMFVGVGAARVRDMFENAKKHAPCIIFIDEIDAVGRQRGAGLGGG 269

Query: 624 G-VTEKVVNQLLTELDGLEEPKDVVIIAATNRPDILDQALLRPGRLDRIVLVPIPNETAR 682
               E+ +NQLL E+DG E    +++IAATNRPD+LD ALLRPGR DR V+VP+P+   R
Sbjct: 270 NDEREQTLNQLLVEMDGFEGHTGIIVIAATNRPDVLDPALLRPGRFDRQVVVPLPDIRGR 329

Query: 683 LEIFKVHTKGMPIGKDVNLEKLAKETKGYTGADIEAVCREAAMIALRENINSEHVESRHF 742
            EI KVH + +P+  DV  + +A+ T G++GAD+  +  EAA+ A R N           
Sbjct: 330 EEILKVHMRKVPVAGDVRADIVARGTPGFSGADLANLVNEAALFAARSN----------- 378

Query: 743 DGAFKRIAPSVKDDDMDEYKDLAKEYGQNAGVSEIEKGPENTGYH 787
               KR+   V  +D ++ KD      +   +   E+   NT YH
Sbjct: 379 ----KRL---VDMEDFEKAKDKIMMGAERRSMVMSEEEKRNTAYH 416



 Score =  177 bits (450), Expect = 1e-48
 Identities = 101/251 (40%), Positives = 150/251 (59%), Gaps = 14/251 (5%)

Query: 174 VTYEDIGGLKEEVKKIREMVELPMRYPELFDKLGIEPPKGVLLAGPPGTGKTLLAKAVAN 233
           VT+ D+ G  E  +++ E+V+  +R P  F KLG   PKGVL+ G PGTGKTLLAKA+A 
Sbjct: 151 VTFADVAGCDEAKEEVSELVDF-LRDPSKFQKLGGRIPKGVLMVGNPGTGKTLLAKAIAG 209

Query: 234 EAGANFYTINGPEIMSKYVGETEENLRKIFEEAEENSPSIIFIDEIDAVAPKRDEASG-- 291
           EA   F++I+G + +  +VG     +R +FE A++++P IIFIDEIDAV  +R    G  
Sbjct: 210 EAKVPFFSISGSDFVEMFVGVGAARVRDMFENAKKHAPCIIFIDEIDAVGRQRGAGLGGG 269

Query: 292 -EVERRMVAQLLTLMDGLESRGQLVILAATNRPDSIDMALRRPGRLDREITIGIPDRHGR 350
            +   + + QLL  MDG E    ++++AATNRPD +D AL RPGR DR++ + +PD  GR
Sbjct: 270 NDEREQTLNQLLVEMDGFEGHTGIIVIAATNRPDVLDPALLRPGRFDRQVVVPLPDIRGR 329

Query: 351 NEILQIHTRNMPLQPDYEKSDVI---------SILNELVGEYDRSKIESLVKLVEKASSE 401
            EIL++H R +P+  D  ++D++         + L  LV E       S  +LV+    E
Sbjct: 330 EEILKVHMRKVPVAGDV-RADIVARGTPGFSGADLANLVNEAALFAARSNKRLVDMEDFE 388

Query: 402 EEIEKILKDGE 412
           +  +KI+   E
Sbjct: 389 KAKDKIMMGAE 399