Pairwise Alignments

Query, 788 a.a., CDC48 family AAA ATPase from Methanococcus maripaludis S2

Subject, 760 a.a., Membrane-bound protease FtsH (cell division protein) from Mycobacterium tuberculosis H37Rv

 Score =  206 bits (524), Expect = 4e-57
 Identities = 104/241 (43%), Positives = 157/241 (65%), Gaps = 2/241 (0%)

Query: 492 SALREVLVEVPNIKWSDVGGLEDIKQDLKEAVEWPIKNKEMFERMGIRPPKGVLLFGPPG 551
           S  +++  ++P   ++DV G+++  ++L E  ++ ++N   ++ +G + PKGVLL+GPPG
Sbjct: 148 SRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDF-LQNPSRYQALGAKIPKGVLLYGPPG 206

Query: 552 TGKTLLAKAVANESEANFISVKGPEIFSKWVGESEKAIREIFRKARQAAPTVIFFDEIDS 611
           TGKTLLA+AVA E+   F ++ G +    +VG     +R++F +A+Q +P +IF DEID+
Sbjct: 207 TGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDA 266

Query: 612 VAPKRGMDFGSS-GVTEKVVNQLLTELDGLEEPKDVVIIAATNRPDILDQALLRPGRLDR 670
           V  +RG   G      E+ +NQLL E+DG  +   V++IAATNRPDILD ALLRPGR DR
Sbjct: 267 VGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDR 326

Query: 671 IVLVPIPNETARLEIFKVHTKGMPIGKDVNLEKLAKETKGYTGADIEAVCREAAMIALRE 730
            + V  P+   R  + +VH+KG P+  D +L+ LAK T G TGAD+  V  EAA++  RE
Sbjct: 327 QIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARE 386

Query: 731 N 731
           N
Sbjct: 387 N 387



 Score =  179 bits (453), Expect = 7e-49
 Identities = 92/214 (42%), Positives = 137/214 (64%), Gaps = 7/214 (3%)

Query: 171 VPNVTYEDIGGLKEEVKKIREMVELPMRYPELFDKLGIEPPKGVLLAGPPGTGKTLLAKA 230
           +P  T+ D+ G+ E V+++ E+ +  ++ P  +  LG + PKGVLL GPPGTGKTLLA+A
Sbjct: 157 MPKTTFADVAGVDEAVEELYEIKDF-LQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARA 215

Query: 231 VANEAGANFYTINGPEIMSKYVGETEENLRKIFEEAEENSPSIIFIDEIDAVAPKRDEAS 290
           VA EAG  F+TI+G + +  +VG     +R +FE+A++NSP IIF+DEIDAV  +R    
Sbjct: 216 VAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGL 275

Query: 291 G---EVERRMVAQLLTLMDGLESRGQLVILAATNRPDSIDMALRRPGRLDREITIGIPDR 347
           G   +   + + QLL  MDG   R  ++++AATNRPD +D AL RPGR DR+I +  PD 
Sbjct: 276 GGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDL 335

Query: 348 HGRNEILQIHTRNMPLQPDYEKSDVISILNELVG 381
            GR  +L++H++  P+  D   +D+  +    VG
Sbjct: 336 AGRRAVLRVHSKGKPMAAD---ADLDGLAKRTVG 366