Pairwise Alignments
Query, 788 a.a., CDC48 family AAA ATPase from Methanococcus maripaludis S2
Subject, 728 a.a., Putative conserved ATPase from Mycobacterium tuberculosis H37Rv
Score = 342 bits (877), Expect = 4e-98
Identities = 236/773 (30%), Positives = 387/773 (50%), Gaps = 117/773 (15%)
Query: 13 DVGKGIVRIDPLTMEKLSLKAGDAIEIAGKEKTYATVWRGYLEDQGKGIIRMDGILRQNT 72
D +G+VR+ P + L ++ DA+ + G T A D G + +D + N
Sbjct: 22 DSRRGVVRLHPNAIAALGIREWDAVSLTGSRTTAAVAGLA-AADTAVGTVLLDDVTLSNA 80
Query: 73 KAGIGDKVKITVVEVKEAKKITLA----PMQAVRFSTGFESYVGSRLV------------ 116
G +V ++ V V A+ +TL+ Q+V T ++ +G +
Sbjct: 81 GLREGTEVIVSPVTVYGARSVTLSGSTLATQSVPPVTLRQALLGKVMTVGDAVSLLPRDL 140
Query: 117 -----EQVVDKGSKVVIGVLGTAFPFIVTGTTPKGPVKINEYTQIE--------LKTEPV 163
+ +G+ T+ VTG P GPV + + + + T
Sbjct: 141 GPGTSTSAASRALAAAVGISWTSELLTVTGVDPDGPVSVQPNSLVTWGAGVPAAMGTSTA 200
Query: 164 TELKETKVPNVTYEDIGGLKEEVKKIREMVELPMRYPELFDKLGIEPPKGVLLAGPPGTG 223
++ + P + E++ G + + K+ E ++L + P L LG GVL++GP G G
Sbjct: 201 GQVSISS-PEIQIEELKGAQPQAAKLTEWLKLALDEPHLLQTLGAGTNLGVLVSGPAGVG 259
Query: 224 KTLLAKAVANEAGANFYTINGPEIMSKYVGETEENLRKIFEEAEENSPSIIFIDEIDAVA 283
K L +AV + G T++GPEI + G+ + + + A + ++ I + DA+
Sbjct: 260 KATLVRAVCD--GRRLVTLDGPEIGALAAGDRVKAVASAVQ-AVRHEGGVLLITDADALL 316
Query: 284 PKRDEASGEVERRMVAQLLTLMDGLESRGQLVILAATNRPDSIDMALRRPGRLDREITIG 343
P A+ V ++++L T + + +V++A + RPD +D LR P DRE+ +
Sbjct: 317 PA---AAEPVASLILSELRTAV----ATAGVVLIATSARPDQLDARLRSPELCDRELGLP 369
Query: 344 IPDRHGRNEILQIHTRNMPLQPDYEKSDVISILNELVGEYDRSKIESLVKLVEKASSEEE 403
+PD R +S +E+L+
Sbjct: 370 LPDAATR----------------------------------KSLLEALLN---------- 385
Query: 404 IEKILKDGEVEDKVKVKLNQLMVKELADKTHGFAGADLAALSKEAAMKTLRRFLPDIDLE 463
V L + E+A +T GF ADLAAL +EAA++ R D
Sbjct: 386 --------------PVPTGDLNLDEIASRTPGFVVADLAALVREAALRAASRASAD---- 427
Query: 464 KEEIPREVLDKIKVTKEDFVGGLKEVEP---SALREVLVEVPNIKWSDVGGLEDIKQDLK 520
R + + ++D +G L + P SA EV V ++ DVG + KQ L
Sbjct: 428 ----GRPPM----LHQDDLLGALTVIRPLSRSASDEVTVG--DVTLDDVGDMAAAKQALT 477
Query: 521 EAVEWPIKNKEMFERMGIRPPKGVLLFGPPGTGKTLLAKAVANESEANFISVKGPEIFSK 580
EAV WP+++ + F R+G+ PP+GVLL+GPPG GKT + +A+A+ + + +VKG E+ K
Sbjct: 478 EAVLWPLQHPDTFARLGVEPPRGVLLYGPPGCGKTFVVRALASTGQLSVHAVKGSELMDK 537
Query: 581 WVGESEKAIREIFRKARQAAPTVIFFDEIDSVAPKRGMDFGSSGVTEKVVNQLLTELDGL 640
WVG SEKA+RE+FR+AR +AP+++F DE+D++AP+RG F SGV+++VV LLTELDG+
Sbjct: 538 WVGSSEKAVRELFRRARDSAPSLVFLDELDALAPRRGQSF-DSGVSDRVVAALLTELDGI 596
Query: 641 EEPKDVVIIAATNRPDILDQALLRPGRLDRIVLVPIPNETARLEIFKVHTKGMPIGKDVN 700
+ +DVV++ ATNRPD++D ALLRPGRL+R+V V P+ AR EI + K +P+ DV+
Sbjct: 597 DPLRDVVMLGATNRPDLIDPALLRPGRLERLVFVEPPDAAARREILRTAGKSIPLSSDVD 656
Query: 701 LEKLAKETKGYTGADIEAVCREAAMIALRENINSEHVESRHFDGAFKRIAPSV 753
L+++A GY+ AD A+ REAA+ A+R +I++ +V + A + + S+
Sbjct: 657 LDEVAAGLDGYSAADCVALLREAALTAMRRSIDAANVTAADLATARETVRASL 709
Score = 95.9 bits (237), Expect = 7e-24
Identities = 78/286 (27%), Positives = 128/286 (44%), Gaps = 25/286 (8%)
Query: 492 SALREVLVEVPNIKWSDVGGLEDIKQDLKEAVEWPIKNKEMFERMGIRPPKGVLLFGPPG 551
S +V + P I+ ++ G + L E ++ + + + +G GVL+ GP G
Sbjct: 198 STAGQVSISSPEIQIEELKGAQPQAAKLTEWLKLALDEPHLLQTLGAGTNLGVLVSGPAG 257
Query: 552 TGKTLLAKAVANESEANFISVKGPEIFSKWVGESEKAIREIFRKARQAAPTVIFFDEIDS 611
GK L +AV + +++ GPEI + G+ KA+ + R ++ D D+
Sbjct: 258 VGKATLVRAVCDGRR--LVTLDGPEIGALAAGDRVKAVASAVQAVRHEGGVLLITDA-DA 314
Query: 612 VAPKRGMDFGSSGVTEKVVNQLLTELDGLEEPKDVVIIAATNRPDILDQALLRPGRLDRI 671
+ P E V + +L+EL VV+IA + RPD LD L P DR
Sbjct: 315 LLP---------AAAEPVASLILSELRTAVATAGVVLIATSARPDQLDARLRSPELCDRE 365
Query: 672 VLVPIPNETARLEIFKVHTKGMPIGKDVNLEKLAKETKGYTGADIEAVCREAAMIALREN 731
+ +P+P+ R + + +P G D+NL+++A T G+ AD+ A+ REAA+ A
Sbjct: 366 LGLPLPDAATRKSLLEALLNPVPTG-DLNLDEIASRTPGFVVADLAALVREAALRAASRA 424
Query: 732 INSEHVESRHFD---GAFKRIAP---------SVKDDDMDEYKDLA 765
H D GA I P +V D +D+ D+A
Sbjct: 425 SADGRPPMLHQDDLLGALTVIRPLSRSASDEVTVGDVTLDDVGDMA 470