Pairwise Alignments

Query, 788 a.a., CDC48 family AAA ATPase from Methanococcus maripaludis S2

Subject, 626 a.a., cell division protein FtsH from Caulobacter crescentus NA1000

 Score =  209 bits (532), Expect = 4e-58
 Identities = 103/229 (44%), Positives = 157/229 (68%), Gaps = 2/229 (0%)

Query: 504 IKWSDVGGLEDIKQDLKEAVEWPIKNKEMFERMGIRPPKGVLLFGPPGTGKTLLAKAVAN 563
           I + DV G+++ K++L+E V++ +K+   F+R+G + PKG LL GPPGTGKTL+A+AVA 
Sbjct: 148 ITFEDVAGVDEAKEELQEVVDF-LKDPAKFQRLGGKIPKGALLVGPPGTGKTLIARAVAG 206

Query: 564 ESEANFISVKGPEIFSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSVAPKRGMDFGSS 623
           E+   F ++ G +    +VG     +R++F +A++ AP +IF DEID+V   RG   G  
Sbjct: 207 EAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGAGLGGG 266

Query: 624 G-VTEKVVNQLLTELDGLEEPKDVVIIAATNRPDILDQALLRPGRLDRIVLVPIPNETAR 682
               E+ +NQLL E+DG E  + +++IAATNRPD+LD ALLRPGR DR V+VP P+   R
Sbjct: 267 NDEREQTLNQLLVEMDGFEANEGIILIAATNRPDVLDPALLRPGRFDRQVVVPNPDVAGR 326

Query: 683 LEIFKVHTKGMPIGKDVNLEKLAKETKGYTGADIEAVCREAAMIALREN 731
            +I +VH K +P+  DV+++ LA+ T G++GAD+  +  EAA++A R+N
Sbjct: 327 EKIIRVHMKNVPLAADVDVKTLARGTPGFSGADLANLVNEAALMAARKN 375



 Score =  180 bits (457), Expect = 2e-49
 Identities = 89/198 (44%), Positives = 135/198 (68%), Gaps = 4/198 (2%)

Query: 174 VTYEDIGGLKEEVKKIREMVELPMRYPELFDKLGIEPPKGVLLAGPPGTGKTLLAKAVAN 233
           +T+ED+ G+ E  ++++E+V+  ++ P  F +LG + PKG LL GPPGTGKTL+A+AVA 
Sbjct: 148 ITFEDVAGVDEAKEELQEVVDF-LKDPAKFQRLGGKIPKGALLVGPPGTGKTLIARAVAG 206

Query: 234 EAGANFYTINGPEIMSKYVGETEENLRKIFEEAEENSPSIIFIDEIDAVAPKRDEASG-- 291
           EAG  F+TI+G + +  +VG     +R +FE+A++N+P IIFIDEIDAV   R    G  
Sbjct: 207 EAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGAGLGGG 266

Query: 292 -EVERRMVAQLLTLMDGLESRGQLVILAATNRPDSIDMALRRPGRLDREITIGIPDRHGR 350
            +   + + QLL  MDG E+   ++++AATNRPD +D AL RPGR DR++ +  PD  GR
Sbjct: 267 NDEREQTLNQLLVEMDGFEANEGIILIAATNRPDVLDPALLRPGRFDRQVVVPNPDVAGR 326

Query: 351 NEILQIHTRNMPLQPDYE 368
            +I+++H +N+PL  D +
Sbjct: 327 EKIIRVHMKNVPLAADVD 344