Pairwise Alignments

Query, 248 a.a., iron export ABC transporter permease subunit FetB from Methanococcus maripaludis S2

Subject, 270 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  110 bits (275), Expect = 3e-29
 Identities = 67/221 (30%), Positives = 124/221 (56%), Gaps = 3/221 (1%)

Query: 27  LGIGKEIFIAEIMALIQLVVLGYVIGIVFNLGIYYASIMIL-FMVSVSAFMVKRNVTKEK 85
           L +G E+ +A      QL+++G+ +  +F+L   + +++ L  M+ V A  +       K
Sbjct: 35  LKLGGEMLLATARMTAQLLLVGFYLKFLFSLESLWVNLLWLSVMLLVGASAILGGARLPK 94

Query: 86  NRKIVCAAF-LSTITITIISLIILTVSK-TVLFEVRYLIPLMGMVIGNSTNAMSIGLERF 143
            R ++   F LS   + +++L++L + + + +++ +YLIPL GM++GNS +   + L+R 
Sbjct: 95  ARLMLPLLFSLSLSLLPLLTLLLLALLQPSPVYQAQYLIPLAGMLLGNSLSGNILALQRL 154

Query: 144 LSDLKSEKDVLWGYLALGATEKQAVNTFVKKAVRAALTPHLNSTKAVGLIFIPGAMVGML 203
            +  + +++   G LALGAT  QA   F++ A++ AL P + +   +GL+ +PG M G +
Sbjct: 155 FNAFEEKQEDYQGRLALGATPWQAAFPFIQGALQQALAPSIAAMSTMGLVTLPGMMTGQI 214

Query: 204 LAGVDPLEAAKVQITIMWMIMASNIFSVTIACYLLYKEFIH 244
           L G DPL A K Q+ IM  I+     SV  A  L  ++ ++
Sbjct: 215 LGGSDPLVAVKYQVVIMLAILVMQSMSVASALSLAVRQCLN 255