Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 444 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  114 bits (286), Expect = 5e-30
 Identities = 106/439 (24%), Positives = 200/439 (45%), Gaps = 18/439 (4%)

Query: 16  KAIVKISLPMVIAMSFQSLYNVIDAIWVAGLGSDALAAIGLFFPFMFAIMAISNGVGIGG 75
           K + +++ PM+  +     + ++D+ ++  LG   LAA G   P    I+ I  G+GI  
Sbjct: 12  KQLFQMTWPMLFGVLSLMSFQLVDSAFIGQLGVLPLAAQGFTMPIQMVIIGIQVGLGIAT 71

Query: 76  SSAISRRIGQNNKDAADNIAVHSIVLGIIIGILLIGVIPFL--GAIFSLIGASGITVTMA 133
           ++ ISR IG    + A  +    IV+G  IG+ LI ++ +L    +  L+GA      + 
Sbjct: 72  TAVISRAIGAGKTEYAKQLGGLVIVIG-GIGVALIALVLYLLRQPLLGLLGAPETVFAII 130

Query: 134 VEYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIYVLNMGVA 193
             Y       A          ++ R  G+T      +++ SVLN++LDPIFI+  ++G+ 
Sbjct: 131 DHYWLWWLASAWTGAMLYFYYSVCRANGNTLLPGTLMMVTSVLNLILDPIFIFTFDLGID 190

Query: 194 GAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKFKLDINIIKEIFSIGL---PASISH 250
           GAA AT+++  + GI  V     ++  +    ++    D+NI + + ++G    PA +S 
Sbjct: 191 GAAIATIIAFGV-GIAIVAPKVAQRQ-WTSYQWQ----DLNISQSLTALGHIMGPAMLSQ 244

Query: 251 LTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYGSANP 310
           L    S    T ++A + G   +A ++ G R      + ++ +   +  + G   G+   
Sbjct: 245 LLPPLSSMFATKLLA-SFGTAAVAAWALGSRFEFFALVAVLAMTMSLPPMIGRMLGAKEI 303

Query: 311 EKLEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGLLVFLKYMFLFY 370
             +    + A +  +  + +IA +  +F   +  L T       IL   LV +    +  
Sbjct: 304 THIRQLVRIACQFVLGFQLLIALVTYVFATPLAELMTSETEVSQILNLHLVIVP---ISL 360

Query: 371 PTLPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFGIIFNQGLTGVWFGMILGH 430
             L + ML  ++   + K   +L IS LR     +P  +  G  F  G+ G++ G ++G+
Sbjct: 361 GALGICMLMVSVANALGKSYVALTISALRLFAFYLPCLW-LGAHF-YGIEGLFIGALVGN 418

Query: 431 VIAVSIAYLLGIYTIRQFK 449
           +IA   A+L     +RQ +
Sbjct: 419 IIAGWAAWLAYQKALRQLE 437