Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  146 bits (369), Expect = 1e-39
 Identities = 113/457 (24%), Positives = 224/457 (49%), Gaps = 28/457 (6%)

Query: 10  LLGDPKKAIVK-ISLPMVIAMSFQSLYNVIDAIWVAGLGSDALAAIGLFFPFMFAIMAIS 68
           LL  P   +++ +++PM+  +    ++N++D  +++ LG+ ALAAI   FP  FA+  I+
Sbjct: 19  LLSAPIPLVLRQMTVPMIFGLVAILMFNLVDTFFISLLGTQALAAISYTFPVTFAVNCIT 78

Query: 69  NGVGIGGSSAISRRIGQNNKDAADNIAVHSIVLGIIIGILLIGVIPFLG-----AIFSLI 123
            G+G+G S+ I R +GQ +   A  ++ H    G+++ +LL+     LG      +F L+
Sbjct: 79  MGIGVGLSTCIGRLLGQGDGRQAARVSSH----GLLLALLLVAAASTLGLLTIEPLFLLL 134

Query: 124 GASGITVTMAVEYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPI 183
           GAS   + +  EY  + +    +L+     N+ +R  GDTK     ++L  ++N  LDP+
Sbjct: 135 GASHELIPLIKEYMVVWYLTIPLLVLPMAGNSAIRATGDTKTPAKIMMLAGLINGALDPL 194

Query: 184 FIY----VLNMGVAGAAWATLLSLVITGILFVYWLFIKKDTFLKI-SFEKFKLDINIIKE 238
            I+       +G+ GAA A+  S  +  ++   +L IK++  L I S    + D    ++
Sbjct: 195 LIFGYGPFPELGIQGAAIASAFSW-LGALIGSLYLLIKREKLLAIPSLPHLRDD---WQQ 250

Query: 239 IFSIGLPASISHLTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVT 298
           I  IG PA++S      S  LL  I+  + G   +A +    RI S+  + L+ L + +T
Sbjct: 251 ILKIGTPAALSTAMNPISGALL-MIMLSSHGTAAVAAYGATQRIESILILVLMSLTSALT 309

Query: 299 VVTGAAYGSANPEKLEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEG 358
                  G+ NP +       +L+  +L + ++  +++     +  LF+  +    +L  
Sbjct: 310 PFMAQNLGAQNPARSFAGLFLSLRFSLLFQLMVFIMMVPLSIPLAALFSQEQAVRDLLWH 369

Query: 359 LLVFLKYMFLFYPTLPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFGIIFNQG 418
            L+ +   + F   +   M+  +    + +   +   S +R  +  +P A+  G ++N  
Sbjct: 370 YLLVVPVSYGFQGVV---MMLVSALNALHQPLKAFQWSFMRLFVFTLPAAWIGGRLYN-- 424

Query: 419 LTGVWFGMILGHVIAVSIAYLLGIYTIRQFKTTLTPE 455
           + G++ G+ +G+++   + YL   Y +R  + TLTP+
Sbjct: 425 IEGLFIGIAVGNILGGLLGYL---YALRLRRQTLTPD 458