Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

 Score = 84.3 bits (207), Expect = 7e-21
 Identities = 93/427 (21%), Positives = 174/427 (40%), Gaps = 24/427 (5%)

Query: 18  IVKISLPMVIAMSFQSLYNVIDAIWVAGLGSDALAAIGLFFPFMFAIMAISNGVGIGGSS 77
           ++K++ P++IA   Q+    +D I   G+ +  +AA+ +        +    G+ +    
Sbjct: 11  LIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLLMALVP 70

Query: 78  AISRRIGQNNKDAADNIAVHSIVLGIIIGILLIGVIPFLGAIFSLIGASGITVTMAVEYS 137
            +++  G   +          ++L +++ + +I V+     I   +       T  V Y 
Sbjct: 71  VVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKTVGYM 130

Query: 138 -TILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIY----VLNMGV 192
             ++F     LLF  +  +   G   TK AM    +G +LNI L+ IF+Y       +G 
Sbjct: 131 HAVIFAVPAYLLFQAL-RSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPELGG 189

Query: 193 AGAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKF-KLDINIIKEIFSIGLPASISHL 251
            G   AT +   I  +L ++++   K       FE F K     +  +F +G P + + L
Sbjct: 190 VGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGFPVAAA-L 248

Query: 252 TMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYGSANPE 311
               ++F + A++    G+  +A         S+  +  + +   V++  G   G  + +
Sbjct: 249 FFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDTK 308

Query: 312 KLEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGLLVFLKYMFLFYP 371
              I+    L  G+    I A L ++F  QI  L+T ++  V +   LL+F       Y 
Sbjct: 309 GAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFA----AIYQ 364

Query: 372 TLPLGMLTAAMFQGVSKGNNSLFISLLRTII----LQIPMAYTFGI---IFNQ--GLTGV 422
            +    + AA   G  +G   +     RT I    L +P  Y  G+   +  Q  G  G 
Sbjct: 365 CMDAVQVVAA---GSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGF 421

Query: 423 WFGMILG 429
           W G I+G
Sbjct: 422 WLGFIIG 428