Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 505 a.a., MATE efflux family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  121 bits (304), Expect = 5e-32
 Identities = 104/433 (24%), Positives = 201/433 (46%), Gaps = 23/433 (5%)

Query: 18  IVKISLPMVIAMSFQSLYNVIDAIWVAGLGSDALAA-IGLFFPFMFAIMAISNGVGIGGS 76
           I+ +S    + +S   L +++D  +++ LG   LAA +G      F   +I  G+ I   
Sbjct: 15  ILVMSSTAAVGISALFLVDLLDIFFLSLLGEAELAAAVGYAGTISFFTTSIGIGLSIALG 74

Query: 77  SAISRRIGQNNKDAADNIAVHSIVLGIIIGILLIGVIPF-LGAIFSLIGASGITVTMAVE 135
           + +SR IG    D A  + + S+++ + +  L+  ++   + A+ +L+GA+G T  +A +
Sbjct: 75  AQVSRAIGAREIDNAKRLLMSSLLVTLAVSSLVSLLVSLNIPALLTLVGATGQTAELAAD 134

Query: 136 YSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIYVLNMGVAGA 195
           Y  IL      +       A LR  GD K +M + ++G  +N+VLDPI I+VL MG+ GA
Sbjct: 135 YLYILVPSLPFICLAMALGAALRAVGDAKLSMVSTLVGGGVNLVLDPILIFVLAMGIEGA 194

Query: 196 AWATLLSLVITGILFVYWLFIKKDTFLKISFEKFKLDINIIKEIFSIGLPASISHLTMAF 255
           A A++L+ +   ++    +F+K     K + + F   +  +K IF+I  PA I+++    
Sbjct: 195 AVASVLARLSVMLVAGRGVFVKHGLGSKPTRDAF---VGDLKPIFAIAGPAMITNVATPI 251

Query: 256 SMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVG----LATGVTVVTGAAYGSANPE 311
               +T  +A+ G       +  GW ++   T    G    L+  +  + G  +G+   +
Sbjct: 252 GNGFMTRAIAEFGD-----AYVAGWAVLGRLTPVAFGMIFALSGAIGPIVGQNFGARRYD 306

Query: 312 KLEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGLLVFLKYMFLFYP 371
           +L      +L    +    +A ++ + ++ I   F    +S   +   L ++   F+F  
Sbjct: 307 RLRDCLTQSLLFCTVYVVGMALVLFLAQDLIVSAFDLKGDSAEFIGFFLTYIAVFFVFSG 366

Query: 372 TLPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFGIIFNQGLTGVWFGMILGHV 431
            L    +  A F  + K   S   ++ +  +  +P  +  G  +  G+ GV  G +LG V
Sbjct: 367 AL---FVANASFNNLGKAKYSTVFNVGKATLGTLPFIW-LGAQYG-GVYGVLIGQVLGSV 421

Query: 432 IAVSIAYLLGIYT 444
               +  + G+YT
Sbjct: 422 ----LFGVAGVYT 430