Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 478 a.a., MATE family efflux transporter from Rhodopseudomonas palustris CGA009

 Score =  124 bits (310), Expect = 9e-33
 Identities = 112/447 (25%), Positives = 208/447 (46%), Gaps = 34/447 (7%)

Query: 16  KAIVKISLPMVIAMSFQSLYNVIDAIWVAGLGSDALAAIGLFFPFMFAIMAISNG-VGIG 74
           + ++++S P V+A++  +   V +  ++  LG++ALAA+ L FPF+   M +S G +G G
Sbjct: 38  RTLLRLSWPNVVALTAGTCVAVAETSYIGRLGTEALAAMALVFPFVILTMTMSGGAMGGG 97

Query: 75  GSSAISRRIGQNNKDAADNIAVHSIVLGIIIGILL-IGVIPFLGAIFSLIGASGITVTMA 133
            +SAI+R +G  + D A  +A+H++++G+  G++  +G++ F     +L+G  G  ++ A
Sbjct: 98  VASAIARALGSGDDDRAAVLAMHALLIGLCFGLVFTVGMLTFGERALALLGGRGAVLSQA 157

Query: 134 VEYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPI----FIYVLN 189
             Y  I F GAVV    N   AILRG G+ K     I+  +VL IVL       F  +  
Sbjct: 158 AGYVHIFFAGAVVPWLMNTFAAILRGTGNMKLPSLMILSSAVLQIVLGGALGLGFGPIPR 217

Query: 190 MGVAGAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKFKLDINIIKEIFSIGLPASIS 249
            G+ G A  TL +  I G   + W+       +K   + F+++  +  +I  +G  +  S
Sbjct: 218 FGMPGVAAGTLTAFSI-GASVMAWVIFSGRAGVKPRLDGFRIERGMFIDILKVGAVSCFS 276

Query: 250 HLTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRI----------VSMGTIPLVGLATGVTV 299
            L    ++ + T ++A   G   +A +  G R+          V + ++P++G+A G   
Sbjct: 277 PLQSVLTITIFTHMLAHF-GTAVLAGYGIGGRLEFMLTSIAFAVGIASVPMIGMAIGAGR 335

Query: 300 VTGAAYGSANPEKLEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGL 359
           V  A          +I++   L +  L   ++   I IF +    LFT  +++   L G 
Sbjct: 336 VKRAR---------QIAWTAGL-VSFLFVGVVGTGIAIFPHLWIDLFT--DDAAVRLAG- 382

Query: 360 LVFLKYMFLFYPTLPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFGIIFNQGL 419
               +Y+    P      L+ +M+         L   L +T  L   +   + +I N G 
Sbjct: 383 ---EQYLRAAAPMYAFIGLSISMYFSAQGAARVLGPVLAQTGRLLFVVGGGWLLIKNHGS 439

Query: 420 TGVWFGMILGHVIAVSIAYLLGIYTIR 446
            G ++ +  G ++ + +   L +   R
Sbjct: 440 AGSFYLLAAGSMVLLGVTSALSVLVTR 466