Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 457 a.a., MATE family efflux transporter from Rhodopseudomonas palustris CGA009

 Score =  115 bits (288), Expect = 3e-30
 Identities = 87/295 (29%), Positives = 147/295 (49%), Gaps = 18/295 (6%)

Query: 18  IVKISLPMVIAMSFQSLYNVIDAIWVAGLGSDALAAIGLFFPFMFAIMAISNG-VGIGGS 76
           +V++++P  IAM   +L  V +  ++  LG++ LAAI L FPF      +S G +G G S
Sbjct: 28  LVRLAIPNTIAMLGTALVAVAETSYIGRLGTEPLAAIALVFPFAMLTQMMSAGAMGGGVS 87

Query: 77  SAISRRIGQNNKDAADNIAVHSIVLGIIIGILLIGVIPFLGA-IFSLIGASGITVTMAVE 135
           SAISR +G  +   A  +A+H+I++GI  G++   V+   G  +F+L+G  G  +  A  
Sbjct: 88  SAISRALGAGDTHRAGVLALHAILIGIGGGLMFTLVMLLFGRPLFALLGGRGDVLEQACS 147

Query: 136 YSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIYVL----NMG 191
           YS +LF GAV +   N   +ILRG GD      A++  + L +V+       L     +G
Sbjct: 148 YSVVLFSGAVSIWLVNTLASILRGTGDMILPAGALLGVAALQVVIGGALGLGLFGMPRLG 207

Query: 192 VAGAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKFKLDINIIKEIFSIGLPASISHL 251
           + G A    ++  I G +F+        + L++    F     I  +I  IG  A ++ L
Sbjct: 208 MPGVASGQAIAFTI-GSMFLLIYLASGRSRLRLQLRAFSFQRPIFVDILKIGALACLAPL 266

Query: 252 TMAFSMFLLTAIVAKAGGNDGIAVFSTGWRI----------VSMGTIPLVGLATG 296
               ++ + T ++A + G   +A +  G R+          V + +IP+VG+A G
Sbjct: 267 QSVLTILIFTKVLA-SYGTTTLAGYGIGSRLEFLLIPIAFAVGVASIPMVGMAIG 320



 Score = 24.3 bits (51), Expect = 0.009
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 43  VAGLGSDALAAIGLFFPFMFAIMAISNGV-GIGGSSAI 79
           +  LG  AL A G     MFA++A++  V G+G ++AI
Sbjct: 413 LVALGGWALVAFGAPASAMFAMVAVAMVVYGLGSAAAI 450