Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 474 a.a., MATE family efflux transporter from Pedobacter sp. GW460-11-11-14-LB5

 Score =  175 bits (444), Expect = 3e-48
 Identities = 120/434 (27%), Positives = 212/434 (48%), Gaps = 13/434 (2%)

Query: 15  KKAIVKISLPMVIAMSFQSLYNVIDAIWVAGL--GSDALAAIGLFFPFMFAIMAISNGVG 72
           K+AI+ +++PM++ M+ +S++ ++D  +V  L   S A+  +GL    +  I +++ G+ 
Sbjct: 35  KRAIILLAIPMMLEMAMESVFALVDLYFVGHLENSSHAIQTVGLTESVLTIIYSLAIGLS 94

Query: 73  IGGSSAISRRIGQNNKDAADNIAVHSIVLGIIIGILL--IGVIPFLGAIFSLIGASGITV 130
           +  ++ ++RRIG+ N +AA    + +IV+ + + I++  +G+I +   I  L+GAS  T 
Sbjct: 95  MAATAVVARRIGEKNPEAASKAGMQTIVIAVFVNIIISILGLI-YAKDILLLMGASAETA 153

Query: 131 TMAVEYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIYVLN- 189
              V +  I+ GG+++++   + N I RG G+   AM ++ + ++ NI+L PIFI  L  
Sbjct: 154 EQGVTFVRIMMGGSIIIVLLFLINGIFRGAGNAAIAMRSLWIANIANIILCPIFINGLGP 213

Query: 190 ---MGVAGAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKFKLDINIIKEIFSIGLPA 246
               G+ GAA AT +   +     VY LF  K+  LKI    F  D + IK I  I  PA
Sbjct: 214 IPAFGLTGAAIATTIGRGLGVTYQVYNLFSGKN-ILKIRISHFLPDFDQIKAIVKIAAPA 272

Query: 247 SISHLTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYG 306
               +  + S   L  +VA  GG+ G A + T  R++    +P  GL+     + G   G
Sbjct: 273 IFQFVIASCSWVFLAELVATTGGDTGSAGYQTALRLMMFFMLPAWGLSNAAATLVGQNLG 332

Query: 307 SANPEKLEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGLLVFLKYM 366
           + + ++ E S    LK  I+   +++ L L   +     FT  EN + +    L  L   
Sbjct: 333 AGHIDRAEKSVFQTLKYIIVFMAVVSVLFLTCGHLFAAFFTSDENVIAVASKALKILSIG 392

Query: 367 FLFYPTLPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFGIIFNQGLTGVWFGM 426
           F+ Y      M+ ++ F G         I++    + QIP+AY        G TGV+  +
Sbjct: 393 FVIYGA---AMVFSSAFNGAGDTWTPTKINIFAFWLFQIPLAYFLAKFLEMGPTGVFIAI 449

Query: 427 ILGHVIAVSIAYLL 440
                     A++L
Sbjct: 450 PTAEAGIAVAAFIL 463



 Score = 33.9 bits (76), Expect = 1e-05
 Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 14/159 (8%)

Query: 13  DPKKAIVKISLPMVIAMSFQSLYNVIDAIWVAGLGSDA-----LAAIGLFFPFMFAIMAI 67
           D  KAIVKI+ P +      S   V  A  VA  G D        A+ L   FM     +
Sbjct: 260 DQIKAIVKIAAPAIFQFVIASCSWVFLAELVATTGGDTGSAGYQTALRLMMFFMLPAWGL 319

Query: 68  SNGVGIGGSSAISRRIGQNNKDAADNIAVHSIVLGIIIGILLIGVIPFL--GAIFSLIGA 125
           SN      ++ + + +G  + D A+  +V   +  II+ + ++ V+ FL  G +F+    
Sbjct: 320 SN----AAATLVGQNLGAGHIDRAEK-SVFQTLKYIIVFMAVVSVL-FLTCGHLFAAFFT 373

Query: 126 SGITV-TMAVEYSTILFGGAVVLLFTNIANAILRGEGDT 163
           S   V  +A +   IL  G V+     + ++   G GDT
Sbjct: 374 SDENVIAVASKALKILSIGFVIYGAAMVFSSAFNGAGDT 412