Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 456 a.a., MATE efflux family protein (RefSeq) from Shewanella loihica PV-4

 Score =  110 bits (276), Expect = 7e-29
 Identities = 104/448 (23%), Positives = 212/448 (47%), Gaps = 28/448 (6%)

Query: 16  KAIVKISLPMVIAMSFQSLYNVIDAIWVAG-LGSDALAAIGLFFPFMFAIMAISNGVGIG 74
           K + + ++P +++M    +Y  ID ++V   LG   LA + L +P    + A+   +G+G
Sbjct: 23  KLVWRYAIPTILSMVVTGVYVAIDGMFVGHYLGEVGLAGMMLAYPVGAILYAVGALIGMG 82

Query: 75  GSSAISRRIGQNNKDAADNIAVHSIVLGIIIG--ILLIGVIPFLGAIFSLIGASGITVTM 132
            +S +S  +G  +   A ++  ++  L ++ G  + L+G   +   I   +GA G  +T 
Sbjct: 83  AASLVSINLGLKDVARARHLLGNAFTLCLLAGTGLALLGT-RWSQTILIWLGAEGEVLTS 141

Query: 133 AVEYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIYVLNMGV 192
           A +Y    F   V  +      A+LR +G        +IL   LN++LD + I V   G+
Sbjct: 142 AEQYLFWYFALGVFPVLAIAFTALLRNDGRPGFVTLVLILSGCLNVLLDWLLIVVFPYGL 201

Query: 193 AGAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKFKLDINIIKEIFSIGLPASISHLT 252
           AGAA AT++    T +  +   F K+ T L I++++ +L+++    I  +G+P+ + +L 
Sbjct: 202 AGAAIATMICQAFTALACLQHFFTKR-TRLGINWQQMRLNLDHCSNILRVGVPSFLMNLY 260

Query: 253 MAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYGSANPEK 312
           ++  + L        GG   +A +       ++  +   G+A G   +     G+   ++
Sbjct: 261 LSIVLTLHNMAFLWVGGPIHVAAYGVVSYAEALFYLIFEGIAFGTQPLFSFNTGAKRFDR 320

Query: 313 LEISYKYALKMGILVETIIAALILIF--ENQITYLFT--YSENSVHILEGLLVFLKYMFL 368
           +  + +  + M ++  T +A ++ I+     + Y+F    SE +   +EG+ ++    F 
Sbjct: 321 VFETLRLVIIMTLV--TALAGVVFIYWAPEYLVYIFAGDNSELAPVAIEGMRLY----FW 374

Query: 369 FYPTLPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFGIIFNQGLTGVWFGMIL 428
             P   L ++ AA FQ +++   +  ++  + +++ + + Y F  +F  G+TGVW  +  
Sbjct: 375 GLPFEGLILVGAAFFQAINRPKEASILTGSKLVLIAM-VLYLFAWLF--GVTGVWISL-- 429

Query: 429 GHVIAVSIAYLLGI---YTIRQFKTTLT 453
                 S + LL I   YT+ +    LT
Sbjct: 430 -----ASCSLLLTIWMVYTLTKLSKKLT 452