Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 461 a.a., MATE efflux family protein (RefSeq) from Shewanella loihica PV-4

 Score = 88.2 bits (217), Expect = 5e-22
 Identities = 92/433 (21%), Positives = 183/433 (42%), Gaps = 19/433 (4%)

Query: 9   NLLGDPKKAIVKISLPMVIAMSFQSLYNVIDAIWVAGLGSDALAAIGLFFPFMFAIMAIS 68
           N  G   K +V ++LP++IA   Q++   ID +    + +  +AA+ +        +   
Sbjct: 2   NQFGFQAKKLVHLALPVLIAQVTQTMMGFIDTVMAGRVSALDMAAVAIGGSLWLPALLFV 61

Query: 69  NGVGIGGSSAISRRIGQNNKDAADNIAVHSIVLGIIIGILLIGVIPFLGAIFSLIGASGI 128
            G+ +  +   +   G +N++A   +A  +  + II   ++I ++ F   IF L+  S  
Sbjct: 62  QGLLVAFTPVFASHHGADNQNAIRPMAFQAAYIAIIGAAVVISILLFAPQIFKLMDLSPE 121

Query: 129 TVTMAVEYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIY-- 186
              ++V Y      G    +   +      G   T   M    +G  +NI  + IFIY  
Sbjct: 122 LAELSVSYLHGFAWGVPAFVLYQVLRGCSEGISYTLPTMVIGFVGLAVNIPANYIFIYGH 181

Query: 187 --VLNMGVAGAAWATLL---SLVITGILFVYWLFIKKDTFLKISFEKFKLDINIIKEIFS 241
                +G AG   AT L   ++ I   +++ W   K+   +K        D+  +K +  
Sbjct: 182 LGAPALGGAGCGIATALVFWAMFIAMTIYMQW--HKRFAVIKPLGAFHLPDLKTMKRMTK 239

Query: 242 IGLPASISHLTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVT 301
            G+P +++ L    S+F + A++    G D +A         S+  +  + +   V++  
Sbjct: 240 HGMPIAMA-LFFEVSLFAIIALLLAPLGADVVAGHQIALNFSSIVFMLPLSIGIAVSIRV 298

Query: 302 GAAYGSANPEKLEISYKYALKMGILVETIIAALILIFENQITYLFTYSEN-SVHILEGLL 360
           G   G    +  ++  K  L +   +    A + ++F  QI  L  Y++N  V  L   L
Sbjct: 299 GYYLGQYKADVAKLVTKVGLAIAFSLAACTAVITVVFRTQIALL--YNQNPEVVALASSL 356

Query: 361 VFLKYMFLFYPTLPLGMLTAAMFQGVSKGNNSLFISLLR----TIILQIPMAYTFGIIFN 416
           +FL  ++    ++   ++TA   +G     ++ +I+L+      ++L   +A T  ++  
Sbjct: 357 MFLAALYQLSDSVQ--VVTAGALRGYHDTRSAFYITLVSYWAIGMVLGYLLAETDILVPA 414

Query: 417 QGLTGVWFGMILG 429
            G  G W G+I G
Sbjct: 415 MGAHGFWIGLIAG 427