Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 455 a.a., MATE efflux family protein (RefSeq) from Shewanella loihica PV-4

 Score =  148 bits (373), Expect = 4e-40
 Identities = 112/435 (25%), Positives = 221/435 (50%), Gaps = 25/435 (5%)

Query: 10  LLGDP-KKAIVKISLPMVIAMSFQSLYNVIDAIWVAGLGSDALAAIGLFFPFMFAIMAIS 68
           LL  P  + ++ +SLP +I +     ++++D  +++ LG++ALAAI   FP    + +I+
Sbjct: 7   LLSQPIGRVLLNMSLPNLIGILTILGFSLVDTFFISQLGTEALAAISFTFPVTLIVSSIA 66

Query: 69  NGVGIGGSSAISRRIGQNNKDAADNIAVHSIVL---GIIIGILLIGVIPFLGAIFSLIGA 125
            G+G G S+ + R IG  N   A  + +H  +L    +I  + L+G + F+G +F+L+GA
Sbjct: 67  IGIGAGVSTNLGRLIGSGNSPKA-KVFLHDALLITFWLIAALSLLGSL-FIGPLFTLLGA 124

Query: 126 SGITVTMAVEYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFI 185
           +  ++ +  +Y  + + GA +L+   + N  LR  GDTK     + L +V+N+VLDP+ I
Sbjct: 125 NDDSLPLIRDYMFLWYLGAPLLVLLMVGNQGLRATGDTKSPAKIMALAAVINLVLDPLLI 184

Query: 186 YVL----NMGVAGAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKFKLDINIIKEIFS 241
           + L     + + GAA ATL+S V+   L  Y L IK++      F   ++  N  +++  
Sbjct: 185 FGLGPFPRLEIQGAAIATLISWVVALSLSGYLLIIKRNLVDFAEFNLERIHCN-WRQLAH 243

Query: 242 IGLPASISHLTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVT 301
           I  PA++ +L    +  ++ A++A+   +  +A F  G R+ S+  I ++ L++ +    
Sbjct: 244 IAQPAALMNLLNPVANAIIMAMLARI-DHSAVAAFGAGTRLESVLLIAVMALSSSLVPFI 302

Query: 302 GAAYGSANPEKLEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGLLV 361
               G+   E+   +   +L+  ++ +T+I   + +    I  LF+       ++E L  
Sbjct: 303 AQNLGAGQTERARDALMLSLRFVLVFQTLIYLPLALMATPIAQLFS---KDPQVIEWLSF 359

Query: 362 FLKYMFLFYPTLPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFGIIFNQGLTG 421
           ++  +   Y  L + +LTA       +  +SL +++ R  +L +P+A            G
Sbjct: 360 YIIALPAAYGPLGMVILTATSLNAYHRPMSSLVLNVCRLFLLLLPLA----------ALG 409

Query: 422 VWFGMILGHVIAVSI 436
            + G + G ++A+ I
Sbjct: 410 SYLGGVKGLLLALPI 424