Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 448 a.a., MATE efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  127 bits (319), Expect = 7e-34
 Identities = 109/423 (25%), Positives = 198/423 (46%), Gaps = 11/423 (2%)

Query: 8   QNLLGDP-KKAIVKISLPMVIAMSFQSLYNVIDAIWVAG-LGSDALAAIGLFFPFMFAIM 65
           Q LL +P  K   + ++P + +M    +Y  ID I+V   LG   LA + L +P    + 
Sbjct: 11  QRLLQEPIAKLFWRYTIPTIASMLVTGVYVTIDGIFVGHYLGETGLAGMMLAYPVGAILY 70

Query: 66  AISNGVGIGGSSAISRRIGQNNKDAADNIAVHSIVLGIIIGIL--LIGVIPFLGAIFSLI 123
           AI   +G+G ++ +S  +GQ N   A  +  ++  L ++ G    L+G + F   I   +
Sbjct: 71  AIGAMIGMGSAALVSINLGQGNVAKARKLLGNAFSLCLLAGAFFALVGGV-FSRDILIAL 129

Query: 124 GASGITVTMAVEYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPI 183
           GA G  +  A EY    F      + +     +LR +G      + +ILG VLN  LD +
Sbjct: 130 GAEGEILENANEYLFWYFALCHFPIISMAFTTLLRNDGRPSMVTFVLILGGVLNTFLDWL 189

Query: 184 FIYVLNMGVAGAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKFKLDINIIKEIFSIG 243
           FI V   G+AGAA AT+LS  +TG+L +   F  + T LKI+ E+ KL ++    I  +G
Sbjct: 190 FIVVFPFGLAGAAIATMLSQAVTGLLCLQHFFGAR-TQLKINLEQMKLKLDNCINIARVG 248

Query: 244 LPASISHLTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGA 303
           LP+ + +L ++  + L        GG   +A +       +   +   G+A G   +   
Sbjct: 249 LPSFLMNLYLSIVLTLHNTAFLWVGGPLHVAAYGVVSYTEAFFYLIFEGIALGTQPIYSF 308

Query: 304 AYGSANPEKLEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGLLVFL 363
             G+   ++++ +   A  M +L  T    L+LI+      ++ ++ ++  +    +  +
Sbjct: 309 NAGAGRFDRVKQARNIAFSMTLL--TAALGLVLIYSRPEWLVYLFAGDNPSLTPVAIEGM 366

Query: 364 KYMFLFYPTLPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFGIIFNQGLTGVW 423
           ++ F   P   L ++ A+ FQ ++    +  ++  + +IL   + Y F   F  G+ GVW
Sbjct: 367 RWYFWGLPMEGLILVGASFFQAINCSKQASILTGAK-LILIAAIIYCFAWAF--GVIGVW 423

Query: 424 FGM 426
             +
Sbjct: 424 VSL 426