Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 452 a.a., MATE efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  142 bits (358), Expect = 2e-38
 Identities = 109/442 (24%), Positives = 217/442 (49%), Gaps = 14/442 (3%)

Query: 16  KAIVKISLPMVIAMSFQSLYNVIDAIWVAGLGSDALAAIGLFFPFMFAIMAISNGVGIGG 75
           + ++ +SLP +I +     +++ D  +++ LG++ALAAI   FP    I +I+ GVG G 
Sbjct: 14  RVLLNMSLPNLIGIMTILGFSLADTFFISQLGTEALAAISFTFPVTLIISSIAIGVGAGV 73

Query: 76  SSAISRRIGQNNKDAADNIAVHSIVLGIII--GILLIGVIPFLGAIFSLIGASGITVTMA 133
           S+ + R IG  N   A      +++L  I+   +  +G I F+  +FSL+GA+  ++ + 
Sbjct: 74  STNLGRLIGSGNAPQAKVFLHDALLLTFILIASLSALGSI-FIEPLFSLLGANETSLPLI 132

Query: 134 VEYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIYVL----N 189
            +Y    + GA +L+   + N  LR  GDT+     + L +++N++LDP+ I+ +     
Sbjct: 133 HDYMMYWYVGAPLLVLLMVGNQGLRSTGDTRSPAMIMTLAAIINLILDPLLIFGIGPFPR 192

Query: 190 MGVAGAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKFKLDINIIKEIFSIGLPASIS 249
           + + GAA ATL S ++   L  Y L IK     + +F+  ++  N  K +  I  PA++ 
Sbjct: 193 LEIQGAAIATLFSWLVALSLSGYLLIIKHRMLERAAFDIDRMRANWSK-LAHIAQPAALM 251

Query: 250 HLTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYGSAN 309
           +L    +  ++ A++A    +  +A F  G R+ S+  I ++ L++ +        G+  
Sbjct: 252 NLINPLANAVIMAMLAHI-DHSAVAAFGAGTRLESVLLIVVMALSSSLMPFIAQNLGAGQ 310

Query: 310 PEKLEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGLLVFLKYMFLF 369
           P++ + +   +LK  ++ +T++   +  F   +  LF+       +LE L  ++  +   
Sbjct: 311 PQRAKQALLLSLKFILVFQTLLYIPLAFFAQPLASLFS---TDPQVLEWLSFYILVLPCA 367

Query: 370 YPTLPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFGIIFNQGLTGVWFGMILG 429
           Y  L + ++ A       +  +SL I+L R ++L +P+A     I   G+ G+   + + 
Sbjct: 368 YGPLGIVIIFATALNAYHRPMSSLVINLCRLVLLMLPLAALGSYI--DGVKGLLLALPIT 425

Query: 430 HVIAVSIAYLLGIYTIRQFKTT 451
           +++     Y L        K T
Sbjct: 426 NLLMGIACYYLAQRICEPVKAT 447