Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 469 a.a., MATE efflux family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 90.9 bits (224), Expect = 8e-23
 Identities = 76/335 (22%), Positives = 145/335 (43%), Gaps = 5/335 (1%)

Query: 16  KAIVKISLPMVIAMSFQSLYNVIDAIWVAGLGSDALAAIGLFFPFMFAIMAISNGVGIGG 75
           + ++ I LP+V  M+  ++    D ++++    +++AA          ++    GV    
Sbjct: 23  REVLHIGLPLVAGMASTTVMQFTDRLFLSHYSVESIAAALPAGLASLLLLLTCMGVTGYA 82

Query: 76  SSAISRRIGQNNKDAADNIAVHSIVLGIIIGILLIGVIPFLGAIFSLIGASGITVTMAVE 135
           S  I++ IG         +   S++  ++ G LL         IFSL G +     +   
Sbjct: 83  SVFIAQYIGAGQPHRVGGVLWQSLIASLVFGGLLAMTSLLAEPIFSLAGHAPELQRLEET 142

Query: 136 YSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFI----YVLNMG 191
           Y  IL  G+V+ L  N       G G T+  M A I  +V+N+ LD + I    +   MG
Sbjct: 143 YFIILQLGSVLSLVGNSLGTFFSGRGRTRPVMLANIAAAVVNVPLDYVLINGVWFFPEMG 202

Query: 192 VAGAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKFKLDINIIKEIFSIGLPASISHL 251
           +AGAA AT++   +T +L    +F +          +++ D  +++ +   GLP+ ++  
Sbjct: 203 IAGAAVATVMGWGVTAVLLAIAVFNRDHETRFGVRSQWRFDAVMMRRLMRYGLPSGVNFF 262

Query: 252 TMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYGSANPE 311
              F++     +V    G   +A  +  + I S+  +P VGL   V  + G A G  +P+
Sbjct: 263 MELFAVTWFVFVVGTL-GEVALAATNIAFSINSVAFLPTVGLNIAVGTMVGQAMGRGDPD 321

Query: 312 KLEISYKYALKMGILVETIIAALILIFENQITYLF 346
               +    L + +   T +A + ++    +  LF
Sbjct: 322 GAARATGSTLHVAMAWMTALALVFVLLPGPLVDLF 356



 Score = 32.0 bits (71), Expect = 4e-05
 Identities = 40/193 (20%), Positives = 78/193 (40%), Gaps = 14/193 (7%)

Query: 16  KAIVKISLPMVIAMSFQSLYNVIDAIWVAG-LGSDALAAIGLFFPFMFAIMAISNGVGIG 74
           + +++  LP  +   F  L+ V   ++V G LG  ALAA  + F         + G+ I 
Sbjct: 248 RRLMRYGLPSGVNF-FMELFAVTWFVFVVGTLGEVALAATNIAFSINSVAFLPTVGLNIA 306

Query: 75  GSSAISRRIGQNNKDAADNIA---VHSIVLGIIIGILLIGVIPFLGAIFSLIGASGITVT 131
             + + + +G+ + D A       +H  +  +    L+  ++P  G +  L     +T  
Sbjct: 307 VGTMVGQAMGRGDPDGAARATGSTLHVAMAWMTALALVFVLLP--GPLVDLFRPDNLTPA 364

Query: 132 MAVEY----STILFGGAVVLLF---TNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIF 184
              +     + +L   A   LF   T I    L+G GDT   M+ + +G +  +++    
Sbjct: 365 AYADIRETTARLLAYVAFYCLFDSLTIIFCGALKGAGDTAFVMWNMTVGCIFVLIIPAYA 424

Query: 185 IYVLNMGVAGAAW 197
           +  L      + W
Sbjct: 425 LRALGWWSLDSLW 437