Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 469 a.a., multi antimicrobial extrusion protein MatE (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  122 bits (305), Expect = 3e-32
 Identities = 107/425 (25%), Positives = 200/425 (47%), Gaps = 24/425 (5%)

Query: 20  KISLPMVIAMSFQSLYNVIDAIWVAGLGSDALAAIGLFFPFMFAIMAISNGVGIGGSSAI 79
           ++S PM + +    +  + DA ++A +G   LAA+G  +P + A+ A S G+  G ++ +
Sbjct: 19  RVSAPMSLGILGVLMVGLADAFFLARVGEVELAAVGFVYPVIVAVSAFSIGMSAGANTVL 78

Query: 80  SRRIGQNNK-DAADNIAVHSIVLGIIIGILLIGVIPFLGA--IFSLIGASGITVTMAVEY 136
           S+ IG+    ++    A+H++  G +IG L +G   +L A  +F+ +GA G      + Y
Sbjct: 79  SQAIGRTESGNSLSCRALHAVGFGALIG-LGVGSALWLVAPVLFTALGARGEVHAAILAY 137

Query: 137 STILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIY----VLNMGV 192
                    +L+ T I NA  R  GD       ++  +V+NI + P+ ++    +  +G+
Sbjct: 138 LPWWAASFPILVVTMILNAAFRAGGDGLTPSALMVATAVVNIAMTPLLVFGIGTIEGLGM 197

Query: 193 AGAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKFKLDINIIKEIFSIGLPASISHLT 252
           AGA  ATL + ++ G+L    + +++ T +       +     +++I +IGLPA+ S   
Sbjct: 198 AGAGIATLAARMLVGVL-ALGIAVRRGT-IAFGAHTARGFTRSVRDIAAIGLPAAASRAV 255

Query: 253 MAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYGSANPEK 312
               M L+TA  A   G+  +A F    R+ ++  +P   L+TG+  + G A+G+    +
Sbjct: 256 NPAGMALVTAAAATL-GDAAVAGFGAAARVQALCLVPFFALSTGLAPIIGQAWGADMQGR 314

Query: 313 ----LEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGLLVFLKYMFL 368
               L +S  +AL  G+      A ++ I  + I  L T    +       L  + +   
Sbjct: 315 ARHALRLSAGFALGYGLCA----AIVLWILADPIAQLMTDDGTAASYTAQYLTIVGWSLG 370

Query: 369 FYPTLPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFGIIFNQGLTGVWFGMIL 428
            Y    L +   A     SK   +L +SL R  ++ +P+A+   +    G TG+    + 
Sbjct: 371 GY---GLVVTVNAALTARSKPGWALGLSLTRIGVIYVPLAWLGALTL--GFTGILLAAVA 425

Query: 429 GHVIA 433
            +VIA
Sbjct: 426 ANVIA 430