Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 452 a.a., conserved hypothetical protein, putative membrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  136 bits (343), Expect = 1e-36
 Identities = 118/453 (26%), Positives = 201/453 (44%), Gaps = 30/453 (6%)

Query: 18  IVKISLPMVIAMSFQSLYNVIDAIWVAG-LGSDALAAIGLFFPFMFAIMAISNGVGIGGS 76
           I   +LP++     Q  Y+++DA  V   LG +ALA++G     +F I+   NG   G  
Sbjct: 16  IFNFTLPLLFGNLLQQTYSLVDAAIVGKFLGINALASVGASTSVVFLILGFCNGCCGGFG 75

Query: 77  SAISRRIGQNNKDAADNIAVHSIVLGIIIGILLIGVIPFLGAIFSLIGASGITVTM---- 132
             ++++ G  +     +    S+ L +++ +++        AIF+ I  + I   M    
Sbjct: 76  IPVAQKFGARDYSTMRSYVSVSLQLAVVMSVVI--------AIFTSIYCADILKMMRTPE 127

Query: 133 -----AVEYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIYV 187
                A  Y  + F G     F N+ ++I+R  GD+K   Y ++L +VLNI+LD   I V
Sbjct: 128 NIFEGAYAYLLVTFIGIPCTFFYNLLSSIIRALGDSKTPFYFLVLATVLNIILDLFCILV 187

Query: 188 LNMGVAGAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKFKLDINIIKEIFSIGLPAS 247
           L  GV GAA AT+ S  ++  L   +++ K D  L+ + ++ K    + K + SIG+P  
Sbjct: 188 LGWGVMGAAIATVFSQGVSAFLCYVYMYRKFD-ILRGTPKERKYQSKLAKTLLSIGVPMG 246

Query: 248 ISHLTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYGS 307
           +     A    +L +    A G   +A F++  RI      PL  L   +   +G  YG+
Sbjct: 247 LQFSITAIGSIMLQS-ANNALGTACVAAFTSAMRIKMFFLCPLESLGMAMATFSGQNYGA 305

Query: 308 ANPEKLEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGLLVFLKYMF 367
             PE++    K +  M +++ T +  LIL+   +   L     + + ILE   +FL    
Sbjct: 306 GKPERIWSGIKASTLM-MVIYTAVTFLILMLGAKSFALIFVDPSEIEILEKTELFLHISV 364

Query: 368 LFYPTLPLGMLTAAMFQGVSKGNNSLF---ISLLRTIILQIPMAYTFGIIFNQGLTGVWF 424
            F+P L L  +     QGV   N ++F     ++  I++ I     FG I       V +
Sbjct: 365 SFFPMLGLLCILRYTIQGVGYTNLAMFSGVSEMIARILVSIYAVPAFGFI------AVCY 418

Query: 425 GMILGHVIAVSIAYLLGIYTIRQFKTTLTPETV 457
           G  +  + A        IY  R+ K  +    V
Sbjct: 419 GDPMAWIAADLFLIPAFIYVYRRLKRQVLTSVV 451