Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 452 a.a., putative transport protein, multidrug efflux protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 92.4 bits (228), Expect = 3e-23
 Identities = 89/432 (20%), Positives = 179/432 (41%), Gaps = 13/432 (3%)

Query: 5   KGVQNLLGDPKKAIVKISLPMVIAMSFQSLYNVIDAIWVAGLGSDALAAIGLFFPFMFAI 64
           + + ++  +  KA++ + LP+VI      +    D + +    +  L A          +
Sbjct: 2   RNIYSIYKEHYKALISLGLPIVIGQIGVIVLGFADTLMIGHHSTIELGAASFVNNVFNLV 61

Query: 65  MAISNGVGIGGSSAISRRIGQNNKDAADNIAVHSIVLGIIIGILLIGVIPFLGAIFSLIG 124
           +  S G   G +  +    G +   +A     +S++  +++  LL   +  L      +G
Sbjct: 62  IIFSTGFSYGLTPIVGGLYGTHQYASAGQALRNSLLANLLVAFLLTIGMTVLYFNVGNLG 121

Query: 125 ASGITVTMAVEYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIF 184
                + +   Y  +L    V ++  N       G  DTK AM+ ++ G+VLNI+ + I 
Sbjct: 122 QPEELIPLIKPYYLVLLASLVFVMLFNGFKQFTDGITDTKTAMWILLGGNVLNIIGNYIL 181

Query: 185 IY----VLNMGVAGAAWATLLSLVITGILFVYWLFIKKDTFL--KISFEKFKLDINIIKE 238
           IY    +  MG+ GA  +TL S ++  ++F+  +F++   FL  K+ F +      I   
Sbjct: 182 IYGKLGLPEMGLLGAGISTLFSRIMMVVVFII-VFMRSPRFLRFKLGFYRLGWSKAIFGR 240

Query: 239 IFSIGLPASISHLTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVT 298
           + S+G P +   + M  + F L+A++    G   +A       I     +   G+   V 
Sbjct: 241 LNSLGWPIAF-QMGMETASFSLSAVMIGWLGTIALASHQVMLAISQFTFMMYYGMGAAVA 299

Query: 299 VVTGAAYGSANPEKLEISYKYALKMGILVETIIAALILIFENQITYLFTYS-ENSVHILE 357
           V      G  +   +  S      + + +  ++++++ +  N +   FT S E +  +  
Sbjct: 300 VRVSNFNGQGDILNVRRSAYAGFHLMMALGVVLSSIVFLCRNYLGGWFTDSTEVAAMVTS 359

Query: 358 GLLVFLKYMFLFYPTLPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFGIIFNQ 417
            +L FL Y F       L +  A   +G+S     + I+ +   ++ +P+ Y  G +   
Sbjct: 360 LILPFLVYQF----GDGLQITFANALRGISDVKLMMLIAFIAYFLISLPVGYFCGFVLEW 415

Query: 418 GLTGVWFGMILG 429
           G+ GVW     G
Sbjct: 416 GIIGVWMAFPFG 427