Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 457 a.a., cation efflux pump (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  161 bits (407), Expect = 5e-44
 Identities = 125/430 (29%), Positives = 216/430 (50%), Gaps = 17/430 (3%)

Query: 18  IVKISLPMVIAMSFQSLYNVIDAIWVA---GLGSDALAAIGLFFPFMFAIMAISNGVGIG 74
           + K++LP V A     LY+++D I++    G+G+DALA +G+    +  I + S  VG G
Sbjct: 18  VFKMALPAVAAQFVNLLYSIVDRIYIGHIPGIGTDALAGVGVTTSLIILISSFSAIVGGG 77

Query: 75  GSSAISRRIGQNNKDAADNIAVHSIVLGIIIGILLIGVIP--FLGAIFSLIGASGITVTM 132
           G+   +  +GQ ++  A  I  +  VL +I+  LL  VI   F+  I    GAS  T+  
Sbjct: 78  GAPLAAIALGQGDRVRAGKILGNGFVL-LILFTLLTSVIAYTFMEPILLFTGASENTLEY 136

Query: 133 AVEYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIYVLNMGV 192
           AV+Y +I   G + +  +   N+ +  +G    AM+++++G++LNI+LDPIFI+  +MGV
Sbjct: 137 AVDYLSIYLLGTIFVEISTGLNSFINAQGRPAIAMFSVLIGALLNIILDPIFIFWFDMGV 196

Query: 193 AGAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKFKLDINIIKEIFSIGLPASISHLT 252
            GAA AT+LS   + +  V +LF ++ + L +      LD  II  I ++G+   I   T
Sbjct: 197 KGAALATVLSQACSAVWVVSFLFSRRAS-LPLEKRYMGLDRKIILSILALGVSPFIMAST 255

Query: 253 MAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYGSANPEK 312
            +   F+L + + K  G+  I+  +     +   ++PL G A G   +    +G  + ++
Sbjct: 256 ESLVGFVLNSSL-KEFGDIYISALTILQSSMQFASVPLTGFAQGFVPIISYNFGHGDKQR 314

Query: 313 LEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGLL-VFLKYMFLFYP 371
           ++  ++  L        I+   +++F + +   FT  E  +  +   + VFL  M +F  
Sbjct: 315 VKDCFRIVLVTMFSFNLILMLFMILFPSTVASAFTSDERLIETVRWTMPVFLGGMTIF-- 372

Query: 372 TLPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFGIIFN-QGLTGVWFGMILGH 430
              L      MF  + +   S+FI+LLR  IL IP+A    I+ N  G+TGV+    +  
Sbjct: 373 --GLQRACQNMFVALGQARISIFIALLRKAILLIPLAL---ILPNFMGVTGVYAAEAISD 427

Query: 431 VIAVSIAYLL 440
             A     LL
Sbjct: 428 ATAAICCTLL 437