Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 439 a.a., DNA-damage-inducible protein F (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 76.6 bits (187), Expect = 1e-18
 Identities = 95/432 (21%), Positives = 173/432 (40%), Gaps = 45/432 (10%)

Query: 16  KAIVKISLPMVIAMSFQSLYNVIDAIWVAGLGSDA----LAAIGLFFPFMFAIMAISNGV 71
           + I++I++P +I+     L  +ID   V  LGS A    +A  G+ F  ++ I      +
Sbjct: 11  RRILQIAVPSIISNITVPLLGLIDVTIVGHLGSPAYIGAIAVGGMLFNIIYWIFGF---L 67

Query: 72  GIGGSSAISRRIGQNNKDAADNIAVHSIVLGIIIGI-LLIGVIPFLGAIFSLIGASGITV 130
            +G S   S+  GQ++ +  + + + S+ +G+ I + LLI   P L A F+LI  +    
Sbjct: 68  RMGTSGMTSQAYGQHDLNEINRLLIRSVGVGLFIALCLLILQYPILNAAFTLIQTTEEVK 127

Query: 131 TMAVEYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIYVLNM 190
            +A  Y  I   GA  +L          G  +++  MY  I  +++NI+    F+Y+L+M
Sbjct: 128 QLATTYFYICIWGAPAMLGLYGFAGWFIGMQNSRFPMYIAITQNIVNIIASLSFVYLLDM 187

Query: 191 GVAGAAWATLLSLVITGILFVYWLFIK-----------KDTFLKISFEKFKLDINIIKEI 239
            VAG A  TL++    G      L+++           KD   K +  +F     + ++I
Sbjct: 188 KVAGVAAGTLIA-QYAGFFMAILLYMRYYSTLRKRIVWKDIIQKQAMYRF---FRVNRDI 243

Query: 240 FSIGLPASISHLTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTI---PLVGLATG 296
           F                + ++T     AG   G  V +    ++ + T+    + G A  
Sbjct: 244 F-----------FRTLCLVIVTMFFTSAGAAQGEVVLAVNTLLMQLFTLFSYIMDGFAYA 292

Query: 297 VTVVTGAAYGSANPEKLEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHIL 356
              + G   G+ N   L  +  +    GI +      L  I   +   L T   N V ++
Sbjct: 293 GEALAGRYIGARNQTALRNTVNHLFYWGIGLSAAFTLLYAIGGKEFLGLLT---NDVSVI 349

Query: 357 EGLLVFLKYMFLFYPTLPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFGIIFN 416
                +    F +   +PL   +A ++ GV  G  +    L   ++  +     +    N
Sbjct: 350 SSSDTY----FYWALAIPLTGFSAFLWDGVFIGATATRQMLYSMLVASVSFFMIYYAFHN 405

Query: 417 -QGLTGVWFGMI 427
             G   +W   I
Sbjct: 406 LLGNHALWLAFI 417