Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 451 a.a., putative transmembrane cation efflux protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  133 bits (335), Expect = 1e-35
 Identities = 98/430 (22%), Positives = 192/430 (44%), Gaps = 12/430 (2%)

Query: 20  KISLPMVIAMSFQSLYNVIDAIWVA-GLGSDALAAIGLFFPFMFAIMAISNGVGIGGSSA 78
           K+ +P V+ M F +++ + D I+V  G+GSDALAA+ +  P       I    G+GGS  
Sbjct: 18  KLLVPTVLGMVFSAIFVITDGIFVGKGIGSDALAAVNITAPLFMIATGIGLMFGVGGSVV 77

Query: 79  ISRRIGQNNKDAADNIAVHSIVLGIIIGILLIGV-IPFLGAIFSLIGASGITVTMAVEYS 137
            S  + Q  + AA+     ++V    I +++  +   F+G +  L+G+S   + + +EY 
Sbjct: 78  ASIYLSQGKRKAANINITQALVFSTFIVLVMSALCFCFVGPLGCLLGSSDRLLPLVIEYM 137

Query: 138 TILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIYVLNMGVAGAAW 197
                  V     +     +R +G    AM    + ++ NI+ D IFI+    G+ GAA+
Sbjct: 138 IWYLPFLVFYELLSTGMFFIRLDGSPNYAMMCNAIAAIFNIIFDYIFIFEFGWGMMGAAF 197

Query: 198 ATLLSLVITGILFVYWLFIKKDTF----LKISFEKFKLDINIIKEIFSIGLPASISHLTM 253
           AT L  V+ G++ V +L           +K+S +   L +     +  +G  A IS  ++
Sbjct: 198 ATSLGTVVGGLMTVIYLTRFSRNIHLHRIKLSLKSLMLTLRNGGYMIKLGTSAFISEASI 257

Query: 254 AFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYGSANPEKL 313
           A  MFL   +     G DG+A FS       +  +    +A     +    +G+  P+++
Sbjct: 258 ACMMFLGNYVFIHHLGEDGVAAFSIACYFFPIIFMVYNAIAQSAQPIISYNFGAGQPDRV 317

Query: 314 EISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGLLVFLKYMFLFYPTL 373
             +   A++  ++       +  +    I  LF   + S    +  +  + Y  + +   
Sbjct: 318 RKALHLAIRTALICGISFFIITFLCRQNIVSLFI--DRSCPAFDIAVNGIPYFGVGFIFF 375

Query: 374 PLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFGIIFNQGLTGVWFGMILGHVIA 433
              M+    +Q + +G  +  I+LLR ++  +   +   ++   G+ G+W  + L  ++ 
Sbjct: 376 AANMIGIGYYQSIRRGQRATIITLLRGVVFMLIGFFVLPLVL--GVPGIWLAVSLAELL- 432

Query: 434 VSIAYLLGIY 443
            +  Y++GIY
Sbjct: 433 -TTLYIIGIY 441