Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 456 a.a., putative membrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  168 bits (426), Expect = 3e-46
 Identities = 114/434 (26%), Positives = 228/434 (52%), Gaps = 16/434 (3%)

Query: 16  KAIVKISLPMVIAMSFQSLYNVIDAIWVA-GLGSDALAAIGLFFPFMFAIMAISNGVGIG 74
           K +++ S+P +I M+  S+YN+ID+I++  G+G+ A+A + + FP M  ++A    V  G
Sbjct: 16  KLLLQYSIPAIIGMTITSIYNIIDSIFIGHGVGAMAIAGLAVSFPLMNLVVAFCTLVSAG 75

Query: 75  GSSAISRRIGQNNKDAADNIAVHSIVLGIIIGILLIGVIPF--LGAIFSLIGASGITVTM 132
           GS+  S R+GQ +   A  I  H+++L  I      G++ F  L  I +  GAS  T+  
Sbjct: 76  GSTIASIRLGQKDMKGATEILSHTLML-CITNSFFFGILSFIFLDDILTFFGASPDTLPY 134

Query: 133 AVEYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIYVLNMGV 192
           A  +  ++  G  +       N ++R  G  K+AM   ++  V NI+L PIFI+    G+
Sbjct: 135 ARSFMQVILLGTPITYTMIGLNNVMRATGYPKKAMLTSMVTVVANIILAPIFIFHFEWGM 194

Query: 193 AGAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKFKLDINIIKEIFSIGLPASISHLT 252
            GAA AT++S +I G+++V   F KKD+ +    + +K+   I++ IF+IG+   + ++ 
Sbjct: 195 RGAATATVISQLI-GMVWVVSHFCKKDSTVHFEGKVWKMKGRIVESIFAIGMSPFLMNVC 253

Query: 253 MAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYGSANPEK 312
               + ++   + + GG+  I  +    R++++  + ++GL  G+  + G  +G+   ++
Sbjct: 254 ACAIVIVINNSLQEHGGDMAIGAYGIINRLLTLYVMIVLGLTMGMQPIVGYNFGAQKIDR 313

Query: 313 LEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGLLV-FLKYMFLFYP 371
           ++ + K  +  G+++ +    +   F + ++ +FT S+     L GL V  L+   L +P
Sbjct: 314 VKQTLKLGIISGVVITSSGFLICEFFPHAVSAVFTDSDE----LIGLAVDGLRLTVLMFP 369

Query: 372 TLPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFGIIFNQGLTGVWFGMILGHV 431
            +   ++    FQ + K   S+F+SL R ++  +P    F   +  GL G+W  +     
Sbjct: 370 FVGAQIVIGNFFQSIGKVKISIFLSLTRQLLYLLPCLLLFPHWW--GLKGIWISL----P 423

Query: 432 IAVSIAYLLGIYTI 445
           ++ S+A++  + ++
Sbjct: 424 VSDSLAFITAVISL 437