Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 452 a.a., MATE efflux family protein (RefSeq) from Shewanella sp. ANA-3

 Score =  140 bits (353), Expect = 9e-38
 Identities = 106/431 (24%), Positives = 215/431 (49%), Gaps = 14/431 (3%)

Query: 16  KAIVKISLPMVIAMSFQSLYNVIDAIWVAGLGSDALAAIGLFFPFMFAIMAISNGVGIGG 75
           + ++ +SLP +I +     +++ D  +++ LG++ALAAI   FP    I +I+ G+G G 
Sbjct: 14  RVLLNMSLPNLIGIMTILGFSLADTFFISQLGTEALAAISFTFPVTLIISSIAIGIGAGV 73

Query: 76  SSAISRRIGQNNKDAADNIAVHSIVLGIII--GILLIGVIPFLGAIFSLIGASGITVTMA 133
           S+ + R IG  N   A      +++L  I+   +  +G I F+  +FSL+GA+  ++ + 
Sbjct: 74  STNLGRLIGSGNAPRAKVFLHDALLLTFILIASLSALGSI-FIKPLFSLLGANDTSLPLI 132

Query: 134 VEYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIYVL----N 189
            +Y    + GA +L+   + N  LR  GDT+     + L +++N++LDP+ I+ +     
Sbjct: 133 HDYMMYWYVGAPLLVLLMVGNQGLRSTGDTRSPAMIMALAAIINLILDPLLIFGIGPFPR 192

Query: 190 MGVAGAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKFKLDINIIKEIFSIGLPASIS 249
           + + GAA ATL S +I   L  Y L IK++     +F+  ++  N  K +  I  PA++ 
Sbjct: 193 LEIQGAAIATLFSWLIALSLSGYLLIIKRNMLEWAAFDIDRMRANWSK-LAHIAQPAALM 251

Query: 250 HLTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYGSAN 309
           +L    +  ++ A++A    +  +A F  G R+ S+  I ++ L++ +        G+  
Sbjct: 252 NLINPLANAVIMAMLAHI-DHSAVAAFGAGTRLESVLLIVVMALSSSLMPFIAQNLGAGQ 310

Query: 310 PEKLEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGLLVFLKYMFLF 369
            ++ + +   +LK   + +T++   +  F   + +LF+       +LE L  ++  +   
Sbjct: 311 TQRAKQALLLSLKFIFVFQTLLYIPLAFFAQPLAHLFS---TDPQVLEWLSFYILVLPCA 367

Query: 370 YPTLPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFGIIFNQGLTGVWFGMILG 429
           Y  L + ++ A       +  +SL I+L R ++L +P+A     I   G+ G+   + + 
Sbjct: 368 YGPLGIVIIFATALNAYHRPMSSLVINLCRLVLLMLPLAALGSYI--DGVKGLLLALPIT 425

Query: 430 HVIAVSIAYLL 440
           +++     Y L
Sbjct: 426 NLLMGIACYYL 436