Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 450 a.a., multi anti extrusion protein MatE (RefSeq) from Shewanella sp. ANA-3

 Score =  124 bits (312), Expect = 5e-33
 Identities = 112/425 (26%), Positives = 196/425 (46%), Gaps = 15/425 (3%)

Query: 8   QNLLGDP-KKAIVKISLPMVIAMSFQSLYNVIDAIWVAG-LGSDALAAIGLFFPFMFAIM 65
           Q LL +P  K   + ++P + +M    +Y  ID I+V   LG   LA + L +P    + 
Sbjct: 11  QRLLQEPIAKLFWRYTIPTIASMLVTGVYVTIDGIFVGHYLGETGLAGMMLAYPVGAILY 70

Query: 66  AISNGVGIGGSSAISRRIGQNNKDAADNIAVHSIVLGIIIGIL--LIGVIPFLGAIFSLI 123
           A+   +G+G ++ +S  +GQ +   A  +  ++  L ++ G    LIG I F   I   +
Sbjct: 71  AVGAMIGMGSAALVSINLGQGHVAKARKLLGNAFSLCLLAGAFFALIGGI-FSRDILIAL 129

Query: 124 GASGITVTMAVEYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPI 183
           GA G  +  A EY    F      + +     +LR +G      + +ILG VLN  LD +
Sbjct: 130 GAEGEILENANEYLFWYFALCHFPIISMAFTTLLRNDGRPSMVTFVLILGGVLNTFLDWL 189

Query: 184 FIYVLNMGVAGAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKFKLDINIIKEIFSIG 243
           FI V   G+AGAA AT+LS  +TG+L +   F  + T LKI+ E+ KL ++    I  +G
Sbjct: 190 FIVVFPFGLAGAAIATMLSQAVTGLLCLQHFFGAR-TQLKINLEQMKLKLDNCLNIARVG 248

Query: 244 LPASISHLTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGA 303
           LP+ + +L ++  + L        GG   +A +       +   +   G+A G   +   
Sbjct: 249 LPSFLMNLYLSIVLTLHNTAFLWVGGPLHVAAYGVVSYTEAFFYLIFEGIALGTQPIYSF 308

Query: 304 AYGSANPEKLEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVH--ILEGLLV 361
             G+   ++++ +   A  M +L   +   LI      + YLF     S+    +EG   
Sbjct: 309 NAGAGRFDRVKQARNIAFGMTLLTAGLCLVLIYSRPEWLVYLFAGDNPSLTPVAIEG--- 365

Query: 362 FLKYMFLFYPTLPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFGIIFNQGLTG 421
            +++ F   P   L ++ A+ FQ ++    +  ++  + ++L   + Y F   F  G+ G
Sbjct: 366 -MRWYFWGLPMEGLILVGASFFQAINCSKQASILTGAK-LLLIAAIIYCFAWAF--GVIG 421

Query: 422 VWFGM 426
           VW  +
Sbjct: 422 VWVSL 426