Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 459 a.a., MATE efflux family protein (RefSeq) from Shewanella sp. ANA-3

 Score = 85.1 bits (209), Expect = 4e-21
 Identities = 92/443 (20%), Positives = 184/443 (41%), Gaps = 19/443 (4%)

Query: 9   NLLGDPKKAIVKISLPMVIAMSFQSLYNVIDAIWVAGLGSDALAAIGLFFPFMFAIMAIS 68
           N  G   K +++++LP++IA   Q++   ID +    + +  +AA+ +        +   
Sbjct: 2   NHSGFQAKRLIQLALPVLIAQVTQTMMGFIDTVMAGRVSAVDMAAVAVGTSLWLPAILFV 61

Query: 69  NGVGIGGSSAISRRIGQNNKDAADNIAVHSIVLGIIIGILLIGVIPFLGA---IFSLIGA 125
            G+ +  +   +   G NN+ A   +A     L +I G   +GV+ FL +   + S +  
Sbjct: 62  QGLLMAFTPLFAHHNGANNQKAIQPLAFQGAYLALIGG---LGVMAFLASAPLVLSHMNL 118

Query: 126 SGITVTMAVEYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFI 185
                 + + Y   +  GA   +   +      G   T   M    +G  +NI  + IFI
Sbjct: 119 EPQLYNLTIGYIDGILWGAPAFVLYQVLRGCSEGISYTLPTMIIGFVGLAVNIPANYIFI 178

Query: 186 Y----VLNMGVAGAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKF-KLDINIIKEIF 240
           Y    +  MG AG   AT L      I    ++ + K       F +F + D   +K++ 
Sbjct: 179 YGHFGMPAMGGAGCGVATALVFWAMLIAMTIYMQLHKKFAALAPFSQFHRPDFATMKKMT 238

Query: 241 SIGLPASISHLTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVV 300
            +G+P +++ L    S+F + A++    G   +A         ++  +  + +   V++ 
Sbjct: 239 KLGMPIAMA-LFFEVSLFAIIALLLAPLGATVVASHQIALNFSAIVFMLPLSIGIAVSIR 297

Query: 301 TGAAYGSANPEKLEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGLL 360
            G   G    +   +  K  L + + +    A L ++F  QI  L+  S+  V +L G L
Sbjct: 298 IGYYLGRDRADISAVVAKVGLWLALSLALSTAILTVLFRFQIAELYN-SDPEVVVLAGSL 356

Query: 361 VFLKYMFLFYPTLPLGMLTAAMFQGVSKGNNSLFISLLR----TIILQIPMAYTFGIIFN 416
           + +  ++    ++   ++ A   +G     ++ +I+L       + L   +AYT  I+  
Sbjct: 357 MLMAALYQLSDSIQ--VVAAGALRGYKDTRSAFYITLFSYWGIGMTLGYTLAYTDFIVPA 414

Query: 417 QGLTGVWFGMILGHVIAVSIAYL 439
            G  G W G+I G   A  + ++
Sbjct: 415 MGAHGFWTGLIAGLTSAALLFFI 437