Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

Subject, 520 a.a., MATE efflux family protein (RefSeq) from Shewanella sp. ANA-3

 Score =  135 bits (340), Expect = 3e-36
 Identities = 105/442 (23%), Positives = 204/442 (46%), Gaps = 29/442 (6%)

Query: 12  GDPKKAIVKISLPMVIAMSFQSLYNVIDAIWVAGLGSDALAA-IGLFFPFMFAIMAISNG 70
           G   + I+ +S    + +S   + +++D  +++ LG   LAA +G      F   +I  G
Sbjct: 9   GSILRHILVMSSTAAVGISALFVVDLLDIFFLSLLGEHELAAAVGYAGSISFFTTSIGIG 68

Query: 71  VGIGGSSAISRRIGQNNKDAADNIAVHSIVLGIIIGILLIGVIP-FLGAIFSLIGASGIT 129
           + I   + +SR IG  + + A  + ++S  +  +I + +  V+  F+  + +L+GASG T
Sbjct: 69  LSIALGALVSRSIGAKDVELAKRLLLNSAAVTTLISLFVSVVVTCFIPELVTLVGASGHT 128

Query: 130 VTMAVEYSTILFGGAVVLLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIYVLN 189
             +A  Y  IL      +         LR  GD K +M + + G  +N VLDPIFI++  
Sbjct: 129 AELAESYLYILVPSLPFICLAMALGGALRAVGDAKLSMMSTLAGGGVNAVLDPIFIFLFA 188

Query: 190 MGVAGAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKFKLDINIIKEIFSIGLPASIS 249
           MG+ GAA A++L+ +   I+    + +K     K +F  F  D   +K IF+I  PA ++
Sbjct: 189 MGIEGAALASVLARIAVFIIAGRGVVVKHQLLGKFNFSYFVAD---LKPIFAIAGPAMLT 245

Query: 250 HLTMAFSMFLLTAIVAKAGGNDGIAVFSTGW----RIVSMGTIPLVGLATGVTVVTGAAY 305
           ++        +T  +A  G       +  GW    R++ +    +  L+  +  + G  +
Sbjct: 246 NIATPIGNAFVTRAIADFGD-----AYVAGWAVLGRLIPVTFGMIFALSGAIGPIVGQNF 300

Query: 306 GSANPEKLEISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGLLVFLKY 365
           G+   +++  S   A++   L   +++ L+ + ++Q+  LF    +S  ++E    F  Y
Sbjct: 301 GAGRFDRVRESLTKAIQFCTLYVVVMSLLLFLLKSQVVSLFDMKGDSAALIE---FFCSY 357

Query: 366 MFLFYPTLPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAY-------TFGIIFNQG 418
           + +F+    +  +  A F  + K   S   ++ +  +  +P  Y        +G++  Q 
Sbjct: 358 IAVFFTFSGILFVANASFNNLGKAKYSTLFNVGKATLGTVPFVYLGAQWGGVYGVLIGQV 417

Query: 419 LTGVWFGMILGHVIAVSIAYLL 440
           L  + FG     V+ V +AY L
Sbjct: 418 LGSILFG-----VMGVWVAYRL 434