Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 263 a.a., ABC transporter permease protein from Pseudomonas fluorescens FW300-N2E2

 Score =  103 bits (256), Expect = 5e-27
 Identities = 58/249 (23%), Positives = 131/249 (52%), Gaps = 9/249 (3%)

Query: 4   FSAMFYRQLRRFTRAKSRVIGSLLNPLVWLVFFGIGWSRAFDFPAAREIFGGVDYLTYLI 63
           FS +  R+  RF   ++R++ +L+ PL+WL+ F  G+  A            + Y  Y++
Sbjct: 8   FSGIVTREWLRFVLQRTRLLSALVRPLLWLLVFAAGFRAALGIAIIAPYDTYIPYEVYIV 67

Query: 64  PGVVSMTVFSGSFISGVTVIWDKQFGFLKETLVAPTSRSEAILGRIMGDSITALIQGVLI 123
           PG+  M +        +++++D++ G ++  L +P  R+  +  +++  S+ +L+Q    
Sbjct: 68  PGLACMILLFNGMQGSLSMVYDREMGSMRVLLTSPLPRAFLLASKLLATSLISLLQVYAF 127

Query: 124 MVLS-LFLVSLNPFGMIPVIFTSFILAVAFASVGISLGLKINSQEGFHLIFGLLMQPLIF 182
           + ++ L+ +     G++  +    ++A+  +++G+ L   I   E F  +   ++ P+ F
Sbjct: 128 LAIAWLYGIQPPTMGLLLALPALLLVALMLSALGLLLSNAIRQLENFAGVMNFVIFPMFF 187

Query: 183 LSGAFYPI----DAMPTWMKILAYINPLTYAVDSARYFLAGFSRFPIMLDVSILIVLSVF 238
           LS A YP+    +A P W+  L  ++P T+ V+  R+ L  + +F  +L +++ + L++ 
Sbjct: 188 LSSALYPLWKMQEASP-WLYWLCSVSPFTHGVELVRFAL--YEQFN-LLAMAVCVGLTLV 243

Query: 239 LVVLAMYTF 247
             +LA++TF
Sbjct: 244 FALLAVWTF 252