Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 262 a.a., ABC-2 from Pseudomonas syringae pv. syringae B728a

 Score = 95.5 bits (236), Expect = 1e-24
 Identities = 60/242 (24%), Positives = 123/242 (50%), Gaps = 10/242 (4%)

Query: 3   AFSAMFYRQLRRFTRAKSRVIGSLLNPLVWLVFFGIGWSRAFDFPAAREI--FGGVDYLT 60
           A   + YR++ RF R   +   +LL P + +V + +     F     R+I   GG  Y+ 
Sbjct: 14  ALKTIVYREVHRFMRIWPQ---TLLPPAITMVLYFV----IFGNLIGRQIGDMGGFTYMQ 66

Query: 61  YLIPGVVSMTVFSGSFISGVTVIWDKQFGF-LKETLVAPTSRSEAILGRIMGDSITALIQ 119
           Y++PG++ M+V + S+ + V+  +  +F   ++E +V+P S    ++G  +G  +  L+ 
Sbjct: 67  YIVPGLIMMSVITNSYGNVVSSFFGAKFQHSIEELMVSPVSPHTILVGYTLGGVLRGLMV 126

Query: 120 GVLIMVLSLFLVSLNPFGMIPVIFTSFILAVAFASVGISLGLKINSQEGFHLIFGLLMQP 179
           G ++ +LS+F   L    +   I    + A  F+ +G    +   + +   +I   ++ P
Sbjct: 127 GFIVTMLSMFFTDLQVHHLGVTIIVVVLTATIFSLLGFINAVFARNFDDISIIPTFVLTP 186

Query: 180 LIFLSGAFYPIDAMPTWMKILAYINPLTYAVDSARYFLAGFSRFPIMLDVSILIVLSVFL 239
           L +L G FY I+ +P + + ++  NP+ + V++ RY + G S   I + ++ +IV +  L
Sbjct: 187 LTYLGGVFYSINLLPPFWQTVSLANPVLHMVNAFRYGILGVSDIKISIALAFMIVATFVL 246

Query: 240 VV 241
            +
Sbjct: 247 YI 248