Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 286 a.a., ABC-2 type transport system permease protein from Synechococcus elongatus PCC 7942

 Score =  107 bits (267), Expect = 3e-28
 Identities = 68/203 (33%), Positives = 111/203 (54%), Gaps = 9/203 (4%)

Query: 17  RAKSRVIGSLLNPLVWLVFFGIGWSRAFDFPAAREIFGG-VDYLTYLIPGVVSMTVFSGS 75
           R  + +I  ++ PL+WLV FG  +  A         FG  V Y  +L  GV+  T FSG+
Sbjct: 39  RRPTTLIAGVIQPLMWLVLFGALFQNA-----PTGFFGPEVRYGQFLGAGVIVFTAFSGA 93

Query: 76  FISGVTVIWDKQFGFLKETLVAP-TSRSEAILGRIMGDSITALIQGVLIMVLSLFLVSLN 134
             +G+ V++D++FGFL   LVAP TSR   ++   +  +  +LIQ + I+++S  L +  
Sbjct: 94  LNAGLPVMFDREFGFLNRLLVAPLTSRFSIVVASALYITTLSLIQTIAILLVSSALGAGL 153

Query: 135 PFGMIPVIFTSFILAVAFASVGISLGLKINSQEGFHLIFGLLMQ--PLIFLSGAFYPIDA 192
           P     ++  + +L +      +SLGL  +      LI  + +   PL+F S A  P+D 
Sbjct: 154 PTATGLLLVLTIVLLLVLGVTALSLGLAFSLPGHIELIAAIFITNLPLLFASTALAPLDF 213

Query: 193 MPTWMKILAYINPLTYAVDSARY 215
           MPTW++ LA +NPL+YA++  R+
Sbjct: 214 MPTWLQWLASLNPLSYAIEPIRF 236