Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 253 a.a., transport transmembrane protein from Sinorhizobium meliloti 1021

 Score = 87.4 bits (215), Expect = 3e-22
 Identities = 60/245 (24%), Positives = 124/245 (50%), Gaps = 12/245 (4%)

Query: 1   MDAFSAMFYRQLRRFTRAKSRVIGSLLNPLVWLVFFGIGWSRAFDFPAAREIFGGVDYLT 60
           ++A  ++++ ++ R  R    ++ S+++P++    + I +  A       +   G+ Y  
Sbjct: 3   IEAVKSIYFFEMARTRRT---LLQSVVSPVISTSLYFIVFGAAIG--GRIQEIDGISYGA 57

Query: 61  YLIPGVVSMTVFSGSFISGVTVIWDKQF-GFLKETLVAPTSRSEAILGRIMGDSITALIQ 119
           ++ PG++ +T+ +    +G   I+  +F G + E L +P S  E +LG +   +   ++ 
Sbjct: 58  FITPGLMMLTLLTQCIGNGSFGIYFPKFTGTIYEVLSSPISMLEIVLGYVGAAATKGMMI 117

Query: 120 GVLIMVLSLFLVSLNPFGMIPVIFTSFILAVAFASVGISLGLKINSQEGFHLIFGLLMQP 179
           G +I+V +   V L+      ++F   + AV F+  G  +G+     E  +LI  L++ P
Sbjct: 118 GTIILVTASLFVDLSIAHPFVMLFFFVLTAVTFSLFGFLIGIWAKDFEQLNLIPMLVVPP 177

Query: 180 LIFLSGAFYPIDAMPTWMKILAYINPLTYAVDSARYFLAGFSRFPIMLDVSILIVLSVFL 239
           L+FL G+FY ID +P + + +++ NP+ Y +   R+     S      DV+ L   ++ L
Sbjct: 178 LVFLGGSFYSIDMLPPFWRAVSHFNPVLYLISGFRWSFFEIS------DVNPLASAAIIL 231

Query: 240 VVLAM 244
           V LA+
Sbjct: 232 VFLAL 236