Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 262 a.a., NodJ ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 58.5 bits (140), Expect = 1e-13
 Identities = 50/222 (22%), Positives = 101/222 (45%), Gaps = 8/222 (3%)

Query: 18  AKSRVIGSLLNPLVWLVFFGIGWSRAFDFPAAREIFGGVDYLTYLIPGVVSMTVFSGSFI 77
           A + ++G+L +PL++L  FG+G          R    GV Y+ +L  G+V+ +  + S  
Sbjct: 31  ALASILGNLADPLIYL--FGLG--AGLGMMVGR--VDGVSYIAFLSAGMVATSAMTASTF 84

Query: 78  SGVTVIWDKQFG--FLKETLVAPTSRSEAILGRIMGDSITALIQGVLIMVLSLFLVSLNP 135
             +   + +       +  L    +  + +LG +   +  A + G  I V++  L     
Sbjct: 85  ETIYATFARMRAQRTWEAILHTQVTIGDIVLGELAWAATKASLAGTGIGVVAATLGYTEW 144

Query: 136 FGMIPVIFTSFILAVAFASVGISLGLKINSQEGFHLIFGLLMQPLIFLSGAFYPIDAMPT 195
             ++  +    +  +AFAS+ + +     S E F     L++ P++FLSGA +P++ +P 
Sbjct: 145 VSLLYALPVIALTGLAFASLAMIVTALAPSYEYFIFYQTLVITPMLFLSGAVFPVNQLPG 204

Query: 196 WMKILAYINPLTYAVDSARYFLAGFSRFPIMLDVSILIVLSV 237
             + +  I PL +++D  R  + G     + L +  L   +V
Sbjct: 205 AFQHVTRILPLAHSIDVIRPIMLGSPLVHVGLHIGALCCYAV 246