Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 263 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 99.8 bits (247), Expect = 5e-26
 Identities = 58/222 (26%), Positives = 109/222 (49%), Gaps = 6/222 (2%)

Query: 3   AFSAMFYRQLRRFTRAKSRVIGSLLNPLVWLVFFGIGWSRAFDFPAAREIFGGVDYLTYL 62
           A SA+  R+  RF R + R + +L+ PLVWL+ F  G+  A            + Y  Y+
Sbjct: 7   ALSAIVTRENLRFVRQRGRFLAALVRPLVWLIVFAAGFRAALGVSIIPPYQTYITYEVYI 66

Query: 63  IPGVVSMTVFSGSFISGVTVIWDKQFGFLKETLVAPTSRSEAILGRIMGDSITALIQ-GV 121
           +PG+  M        S + +++D++ G ++  L +P  R   +  +++   I +++Q  V
Sbjct: 67  LPGLCGMIQLFNGMQSSLALVYDQEMGSMRLLLTSPLPRWWLLFSKLLAGVIVSILQVAV 126

Query: 122 LIMVLSLFLVSLNPFGMIPVIFTSFILAVAFASVGISLGLKINSQEGFHLIFGLLMQPLI 181
            + + +L  +++ P G + V+    I  +   + G+ +   +   E F  +   ++ P+ 
Sbjct: 127 FLAIAALTGITVPPVGYVAVLPALVISGLMLGAFGLLISSTVRQLENFAGVMNFVIFPMF 186

Query: 182 FLSGAFYPI----DAMPTWMKILAYINPLTYAVDSARYFLAG 219
           FLS A YP+    ++ P    I A +NP TYAV+  R+ L G
Sbjct: 187 FLSSALYPLWKMAESSPLLRDICA-LNPFTYAVELIRFALYG 227