Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 270 a.a., ABC-2 transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score = 89.7 bits (221), Expect = 5e-23
 Identities = 56/239 (23%), Positives = 123/239 (51%), Gaps = 12/239 (5%)

Query: 7   MFYRQLRRFTRAKSRVIGS-LLNPLVWLVFFGIGWSRAFDFPAAREIFGGVDYLTYLIPG 65
           ++ +++RRF +   + + + L+  L++L  F +        P   +  GG+ ++ +L PG
Sbjct: 27  LYLKEVRRFLKVYLQTLAAPLVTTLIFLAIFALSVG-----PQTAQ--GGLGFMEFLAPG 79

Query: 66  VVSMTVFSGSFIS-GVTVIWDKQFGFLKETLVAPTSRSEAILGRIMGDSITALIQGVLIM 124
           ++ M +   +F +   ++I  K  G + + L+ P + +E  L   +G     ++ G+ + 
Sbjct: 80  LIMMAMVQNAFANTSSSLIIAKVQGNIVDVLMPPLNATELTLAYALGGVTRGVMVGIFVA 139

Query: 125 VLSLFLVSLNPFGMIPVIFTSFILAVAFASVGISLGLKINSQEGFHLIFGLLMQPLIFLS 184
           +  +  V+L+   +  +++ +F  ++  + +G+  G+  +  +    +   ++ PL FLS
Sbjct: 140 LGMMAFVTLHIHSVFFIVYHAFAASLMLSLLGMIAGIWADKFDHMASVTNFIVTPLSFLS 199

Query: 185 GAFYPIDAMPTWMKILAYINPLTYAVDSARYFLAGFSRFPIMLDVSILIVLSVFLVVLA 243
           G FY ID +P  ++ LA++NP  Y +D  R+   GF      + ++ L+V+  F VVLA
Sbjct: 200 GTFYTIDRLPESLRFLAHLNPFFYMIDGFRF---GFIGHDQAMPITGLVVVGGFNVVLA 255