Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 251 a.a., ABC-type polysaccharide/polyol phosphate export systems, permease component from Dechlorosoma suillum PS

 Score = 76.3 bits (186), Expect = 6e-19
 Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 11/246 (4%)

Query: 1   MDAFSAMFYRQLRRFTRAKSRVIGS-LLNPLVWLVFFGIGWSRAFDFPAAREIFGGVDYL 59
           M  F  +FY+++ RF +   + + + +L  L++L+ F    +   D         GV Y 
Sbjct: 2   MLGFRTLFYKEVLRFWKVGFQTVAAPVLTALLYLLIF----AHVLD---ENTRIHGVTYT 54

Query: 60  TYLIPGVVSMTVFSGSFI-SGVTVIWDKQFGFLKETLVAPTSRSEAILGRIMGDSITALI 118
            +L+PG+V M+V   +F  S  ++I  K  G +   L+ P +  E  L  ++      ++
Sbjct: 55  AFLVPGLVMMSVLQNAFANSSSSLIQSKVTGSVVFVLLPPIAYGEFFLAYVLAALARGVV 114

Query: 119 QGVLIMVLSLFLVSLNPFGMIPVIFTSFILAVAFASVGISLGLKINSQEGFHLIFGLLMQ 178
            G+ +++++L    L     +  +  + +      ++G+  G+  +  +        L+ 
Sbjct: 115 VGLGVLLMTLAFAPLQLAHPLWALAFAVLGGAMLGALGMIAGIWADKFDQLAAFQNFLIM 174

Query: 179 PLIFLSGAFYPIDAMPTWMKILAYINPLTYAVDSARYFLAGFSRFPIMLDVSILIVLSVF 238
           PL  LSG FY I ++P + + +++ NP+ Y +D  RY   G S        S+L+V   F
Sbjct: 175 PLTMLSGVFYSIHSLPPFWQQVSHFNPVFYMIDGFRYGFFGVS--DAAPQQSLLVVSVCF 232

Query: 239 LVVLAM 244
             + A+
Sbjct: 233 AALTAL 238