Pairwise Alignments

Query, 386 a.a., homocitrate synthase family protein from Methanococcus maripaludis S2

Subject, 538 a.a., (R)-citramalate synthase (EC 2.3.3.21) (from data) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  140 bits (353), Expect = 9e-38
 Identities = 107/359 (29%), Positives = 165/359 (45%), Gaps = 24/359 (6%)

Query: 16  KDCYLYDTTLRDGEQTPGVCFAGDQKLEIAKKLDELKIKQIEAGFPIVSENERKAIKSIT 75
           +  +LYDTTLRDG Q+  +      KL+IA +LDEL I  IE G+P  +  +    K I 
Sbjct: 3   RQIHLYDTTLRDGSQSEDINLNTPDKLKIALRLDELGIAYIEGGWPGSNPVDVAFFKEIR 62

Query: 76  GEGLN-AQILAL------SRVLKEDID-KAIECD-VDGIITFIATSPMHLKYKLH----K 122
              L  A+I A       S   + D + KAI     D    F  +   H +  L     +
Sbjct: 63  NYNLKQAKISAFGSTHHPSHTAENDPNLKAIAAARTDAAAIFGKSCERHAREALRLDGRR 122

Query: 123 NLDEVEEMGMKAVEYAKDHGLFVAFSAE---DATRTPLEDIIRIHKNAEEHGADRVHIAD 179
           NLD + +    ++ + K     V F AE   D  R      + + + A E G D + + D
Sbjct: 123 NLDIIHD----SIAFLKKQVAEVFFDAEHFFDGYRHNAAYALEVLRRAHEAGGDVLVLCD 178

Query: 180 TLGCATPQAMYHICSELSKHLKKAHIGVHCHNDFGFAVINSIYGLIGGAKAVSTTVNGIG 239
           T G   P  ++ I + + + L +A +G+H HND   AV NSI  +  GA  V  T+NG+G
Sbjct: 179 TNGGTLPHEVHDIVTAVREQLPEAKLGIHAHNDCEVAVANSIAAVQAGAVQVQGTMNGVG 238

Query: 240 ERAGNAAIEEIAMALKV----LYDHDMGLNTEILTEISKLVENYSKIKIPENKPLVGEMV 295
           ER GNA +  +   L++     Y        + LT +S  V   + +     +P VG   
Sbjct: 239 ERCGNANLSSVIPILELKSAGAYACLPEGRLQQLTAVSSYVSEVTNLPPFSRQPFVGRSA 298

Query: 296 FYHESGIHVDAVLENPLTYEPFLPEKIGQKRKIILGKHSGCRAVAHRLQELGLEASRDE 354
           F H+ G+HV AV  N   YE   PE +G  +++++ + +G   +    +  G    +DE
Sbjct: 299 FAHKGGVHVSAVNRNATLYEHITPESVGNHQRVLITELAGRSNIVSLARRFGFHLDKDE 357