Pairwise Alignments

Query, 446 a.a., SLC13 family permease from Methanococcus maripaludis S2

Subject, 596 a.a., Di- and tricarboxylate transporters from Pseudomonas stutzeri RCH2

 Score =  134 bits (336), Expect = 1e-35
 Identities = 69/197 (35%), Positives = 109/197 (55%), Gaps = 2/197 (1%)

Query: 251 YRTNKMWIATLVFTFVVLMTATGTIPLVTAFMLGACMVVMTGCITMQEAFNSISWTTIFL 310
           +R +K  IA +    V+++ A G +P+    ++GA  V+ T C+ +++A+ ++ W  + L
Sbjct: 396 FRRDKAPIAIIATLAVMVLAAFGVMPIEGLAIIGAASVLATRCLDVEDAYKAVDWKILSL 455

Query: 311 FAGMLPLGSAMAATGAATMIANTVITYVH--SPLALLAAAYILTALITEVMSNTATAALV 368
             GML +  AM   G   +I   V T      PL +L+  Y+LT+L+TE++SN A A L+
Sbjct: 456 IFGMLAISIAMDKVGLVQLIVQNVTTLTPWAGPLFMLSFIYLLTSLLTEMLSNNAVAVLI 515

Query: 369 MPLGIALADAFDVSAKPILMAIAVAASSCFLTPIATPPNMIILGPGGYSFKDYAKSGWPL 428
            P+ I LA    V  +  ++A+  AAS+ F TPI    N  +   GGY F D+ K G PL
Sbjct: 516 TPIAIGLAQHMGVDPRAFVVAVMFAASASFATPIGYQTNTFVYNAGGYRFTDFLKIGIPL 575

Query: 429 EILCAVVAIAVIPMIWP 445
            +L  +V   VIP+ WP
Sbjct: 576 NLLLWMVGTLVIPLFWP 592



 Score =  108 bits (271), Expect = 4e-28
 Identities = 64/184 (34%), Positives = 93/184 (50%), Gaps = 3/184 (1%)

Query: 59  VTAMLVPVALSFPGIDILSSSRAFADFGNKWVVLFMAAFILGEAVFRTGFADKIGQLTVK 118
           V A+ V V L+     +L+         N   V     FI+  A+ RTG  D +G     
Sbjct: 32  VVAIAVAVLLA---TQLLTPGEVLGVLSNSAPVTIACMFIISAALERTGCIDALGNWLGN 88

Query: 119 AAGKSQLKLMLLVMLAIGTMSAFLSNTGTTAAFIPIVMGICVSASLKPGKLLIPMAYAAS 178
             G S  +++  + +    +SA L+NT   A   P+ + +   A   P KLLIP++YA  
Sbjct: 89  LVGTSPTRVLFGLTITALVISACLNNTPVVAILTPVAISLAKRAGTTPSKLLIPLSYATI 148

Query: 179 LGGTLTLIGTPPNGLVNDALEKSGIAPFGFFEFAKIGILIFIVGILYYGTIGHKLLPESK 238
           LGGTLT+IGT  N LV+    K+G+ PFG FE    G+++   G++Y  TIG  LLPE  
Sbjct: 149 LGGTLTMIGTSTNILVDGVARKAGLEPFGMFEITGAGLIMAAAGMVYLLTIGKHLLPERD 208

Query: 239 AKAK 242
             +K
Sbjct: 209 TLSK 212



 Score = 43.1 bits (100), Expect = 2e-08
 Identities = 44/190 (23%), Positives = 75/190 (39%), Gaps = 12/190 (6%)

Query: 40  LIILGTAAVLFFTEALPLPVTAMLVPVALSFPGIDILSSSRAFADFGNKWVVLFMAAFIL 99
           + I+ T AV+       +P+  + +  A S      L    A+     K + L      +
Sbjct: 403 IAIIATLAVMVLAAFGVMPIEGLAIIGAASVLATRCLDVEDAYKAVDWKILSLIFGMLAI 462

Query: 100 GEAVFRTGFADKIGQ-LTVKAAGKSQLKLMLLVMLAIGTMSAFLSNTGTTAAFIPIVMGI 158
             A+ + G    I Q +T        L ++  + L    ++  LSN        PI +G+
Sbjct: 463 SIAMDKVGLVQLIVQNVTTLTPWAGPLFMLSFIYLLTSLLTEMLSNNAVAVLITPIAIGL 522

Query: 159 CVSASLKPGKLLIPMAYAASLGGTLTLIGTPPNGLVNDALEKSGIAPFGFFEFAKIGI-- 216
                + P   ++ + +AAS     T IG   N  V +A        + F +F KIGI  
Sbjct: 523 AQHMGVDPRAFVVAVMFAAS-ASFATPIGYQTNTFVYNA------GGYRFTDFLKIGIPL 575

Query: 217 --LIFIVGIL 224
             L+++VG L
Sbjct: 576 NLLLWMVGTL 585