Pairwise Alignments

Query, 446 a.a., SLC13 family permease from Methanococcus maripaludis S2

Subject, 608 a.a., Di- and tricarboxylate transporters from Pseudomonas stutzeri RCH2

 Score =  140 bits (352), Expect = 1e-37
 Identities = 71/189 (37%), Positives = 115/189 (60%), Gaps = 2/189 (1%)

Query: 37  IITLIILGTAAVLFFTEALPLPVTAMLVPVALSFPGIDILSSSRAFADFGNKWVVLFMAA 96
           ++ L +L     LF      + V A+L  VAL   G+  LS   + A F +  VVL    
Sbjct: 6   LLVLALLAGCIGLFALNKPRMDVVAVLAMVALPLTGV--LSVQESLAGFSDPSVVLIATL 63

Query: 97  FILGEAVFRTGFADKIGQLTVKAAGKSQLKLMLLVMLAIGTMSAFLSNTGTTAAFIPIVM 156
           F++G+ + RTG A ++G   ++AAG S+ +L++L+MLA+  + + +S+TG  A FIP+V+
Sbjct: 64  FVIGDGLVRTGIAYRLGDWLMRAAGSSETRLLILLMLAVAGLGSVMSSTGVVAIFIPVVL 123

Query: 157 GICVSASLKPGKLLIPMAYAASLGGTLTLIGTPPNGLVNDALEKSGIAPFGFFEFAKIGI 216
           GI     + P +L++P+A+A  + G LTL+ TPPN +VN  L ++G+  F FF+F  IG+
Sbjct: 124 GIANRMKVSPRRLMMPLAFAGLISGMLTLVATPPNLVVNSELRRAGLEGFAFFDFTPIGL 183

Query: 217 LIFIVGILY 225
            I ++GI Y
Sbjct: 184 AILLLGIGY 192



 Score =  139 bits (349), Expect = 3e-37
 Identities = 69/201 (34%), Positives = 117/201 (58%), Gaps = 2/201 (0%)

Query: 247 DTLKYRTNKMWIATLVFTFVVLMTATGTIPLVTAFMLGACMVVMTGCITMQEAFNSISWT 306
           D +    N+   A L    ++++  +G +P V A ++G  ++ +  CI M  A+ +I W 
Sbjct: 407 DDVAPAANQAPFALLGLAVMIVLMVSGVVPNVLAALIGCLVMGLFRCIDMDSAYKAIHWQ 466

Query: 307 TIFLFAGMLPLGSAMAATGAATMIANTVITYVHS--PLALLAAAYILTALITEVMSNTAT 364
           ++ L  GMLP   A+  TG   +  + ++  +    P ALLA  ++LTALI   +SNTAT
Sbjct: 467 SLILIVGMLPFALALQKTGGIALATSGLVGLLGDAGPHALLACLFLLTALIGLFISNTAT 526

Query: 365 AALVMPLGIALADAFDVSAKPILMAIAVAASSCFLTPIATPPNMIILGPGGYSFKDYAKS 424
           A L+ P+ ++ A+    S  P  M +A+AAS+ F+TPI+ P N ++LGPG Y F D+ + 
Sbjct: 527 AVLMAPVALSTAEQLGASPYPFAMIVALAASAAFMTPISLPVNTLVLGPGQYRFADFVRI 586

Query: 425 GWPLEILCAVVAIAVIPMIWP 445
           G P  +L   V++A++P+++P
Sbjct: 587 GVPFTLLVMAVSVALVPLLFP 607



 Score = 63.5 bits (153), Expect = 2e-14
 Identities = 45/171 (26%), Positives = 84/171 (49%), Gaps = 10/171 (5%)

Query: 282 MLGACMVVMTGCITMQEAFNSISWTTIFLFAGMLPLGSAMAATGAATMIANTVITYV-HS 340
           +L    + +TG +++QE+    S  ++ L A +  +G  +  TG A  + + ++     S
Sbjct: 31  VLAMVALPLTGVLSVQESLAGFSDPSVVLIATLFVIGDGLVRTGIAYRLGDWLMRAAGSS 90

Query: 341 PLALLAAAYILTALITEVMSNTATAALVMPLGIALADAFDVSAKPILMAIAVAA-SSCFL 399
              LL    +  A +  VMS+T   A+ +P+ + +A+   VS + ++M +A A   S  L
Sbjct: 91  ETRLLILLMLAVAGLGSVMSSTGVVAIFIPVVLGIANRMKVSPRRLMMPLAFAGLISGML 150

Query: 400 TPIATPPNMII------LGPGGYSFKDYAKSGWPLEILCAVVAIAVIPMIW 444
           T +ATPPN+++       G  G++F D+   G  L IL   +   ++   W
Sbjct: 151 TLVATPPNLVVNSELRRAGLEGFAFFDFTPIG--LAILLLGIGYMLVARRW 199



 Score = 36.6 bits (83), Expect = 2e-06
 Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 22/191 (11%)

Query: 33  SQKAIITLIILGTAAVLFFTEALPLPVTAMLVPVALS-FPGIDILSSSRAFADFGNKWVV 91
           + +A   L+ L    VL  +  +P  + A++  + +  F  ID+ S+ +A   + +  ++
Sbjct: 413 ANQAPFALLGLAVMIVLMVSGVVPNVLAALIGCLVMGLFRCIDMDSAYKAI-HWQSLILI 471

Query: 92  LFMAAFIL------GEAVFRTGFADKIGQLTVKAAGKSQLKLMLLVMLAIGTMSAFLSNT 145
           + M  F L      G A+  +G    +G      AG   L   L ++ A+  +  F+SNT
Sbjct: 472 VGMLPFALALQKTGGIALATSGLVGLLGD-----AGPHALLACLFLLTAL--IGLFISNT 524

Query: 146 GTTAAFIPIVMGICVSASLKPGKLLIPMAYAASLGGTLTLIGTPPNGLVNDALEKSGIAP 205
            T     P+ +         P    + +A AAS    +T I  P N LV       G   
Sbjct: 525 ATAVLMAPVALSTAEQLGASPYPFAMIVALAAS-AAFMTPISLPVNTLV------LGPGQ 577

Query: 206 FGFFEFAKIGI 216
           + F +F +IG+
Sbjct: 578 YRFADFVRIGV 588