Pairwise Alignments

Query, 446 a.a., SLC13 family permease from Methanococcus maripaludis S2

Subject, 487 a.a., transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  128 bits (321), Expect = 5e-34
 Identities = 115/439 (26%), Positives = 202/439 (46%), Gaps = 37/439 (8%)

Query: 34  QKAIITLIILGTAAVLFFTEALPLPVTAMLVPVA----LSFPGI-------------DIL 76
           Q+ +I + +L  AA+L+  E +P+  T++++ V     LS  G               +L
Sbjct: 51  QQRVIAIFLL--AALLWVFEPIPIYSTSVVIIVLEVLMLSDKGFILFRLGEGTSEFGALL 108

Query: 77  SSSRAFADFGNKWVVLFMAAFILGEAVFRTGFADKIGQLTVKAAGKSQLKLMLLVMLAIG 136
            S+   A F N  ++LF+  F L  A  +      + ++ +K  G +   +ML +M+   
Sbjct: 109 KSTEIMATFANPIIMLFLGGFFLAMAATKYRLDVNLARVLLKPFGNNPKYVMLGLMMITA 168

Query: 137 TMSAFLSNTGTTAAFIPIVMG-ICVSASLKPGKLLIPMAY--AASLGGTLTLIGTPPNGL 193
             S F+SNT TTA  + I+   I V     PG++   +    AA++GG  T IGTPPN +
Sbjct: 169 VFSMFMSNTATTAMMLSILTPVIAVFGPKDPGRVAFALCIPVAANIGGIGTPIGTPPNAI 228

Query: 194 VNDALEKSGIAPFGFFEFAKIGILIFIVGILYYGTIGHKLLPESKAKAKDFVSDTLKYRT 253
               L    +  F   E+   GI  F+V ++    +  + +  ++ K  +        +T
Sbjct: 229 ALKYLVGDNLITFA--EWMAFGIP-FVVILMALAWLLIEFMYRAEQKTIELTIKGKFLKT 285

Query: 254 NKMWIATLVFTFVVLMTATGTIPLVTAFMLGACMVVM---TGCITMQEAFNSISWTTIFL 310
            K  I  + F   +L+   G++  + ++ +    V +   TG I  +E    ISW  ++L
Sbjct: 286 PKAIIVYITFASTILLWMLGSLHGMNSYSVALIPVAVFSVTGIIG-KEDLKMISWDVLWL 344

Query: 311 FAGMLPLGSAMAATGAATMIANTVITYVHSPLALLAAAYILTALITEVMSNTATAALVMP 370
            +G + LG A+  TG A ++ +++    +SP  ++  A IL  L+   MS+TATA L+MP
Sbjct: 345 VSGGIALGLALDKTGLAELVVHSIPFDQYSPYVVILGAAILCLLMANFMSHTATANLLMP 404

Query: 371 LGIALADAFDV-----SAKPILMAIAVAASSCFLTPIATPPNMIILGPGGYSFKDYAKSG 425
           +  AL  +            +++ +  AAS     PI+TPPN +         +  AK G
Sbjct: 405 IMAALGASMTPLNPLGGEVTLILVVTFAASLGMSLPISTPPNALAHATRNVQSQQMAKVG 464

Query: 426 WPLEILCAVVAIAVIPMIW 444
             L I   +++     M+W
Sbjct: 465 IILGIFGVLMSFV---MVW 480