Pairwise Alignments

Query, 446 a.a., SLC13 family permease from Methanococcus maripaludis S2

Subject, 493 a.a., sodium: dicarboxylate cotransporter from Marinobacter adhaerens HP15

 Score =  146 bits (368), Expect = 2e-39
 Identities = 124/423 (29%), Positives = 200/423 (47%), Gaps = 39/423 (9%)

Query: 47  AVLFFTEALPLPVTAMLVPVALSFPGIDILSSSRAFADFGNKWVVLFMAAFILGEAVFRT 106
           A  + TEA+P+P TA+L P+ L  P + + +   A   + N  + LF+  F LG A+ R 
Sbjct: 61  ATWWSTEAIPIPATALL-PIVL-VPALGLGTVGEATEPYANPIIFLFLGGFTLGLAMQRW 118

Query: 107 GFADKIGQLTVKAAGKSQLKLMLLVMLAIGTMSAFLSNTGTTAAFIPIVMGICVSASLKP 166
               +I  +T+KA G    + +   MLA   +S ++SNT T    +PI  G+ V A +  
Sbjct: 119 NLHRRIALMTLKAVGSKPRRQIAGFMLATAFLSMWVSNTATAIMMLPI--GLSVVAMMDT 176

Query: 167 G-----------KLLIPMAYAASLGGTLTLIGTPPNGLVNDALEKSGIAPFGFFEFAKIG 215
                        LL+ +AY+AS+GG  TLIGTPPN L+   L ++     GF ++  +G
Sbjct: 177 NDNPEGVRRYATALLLAIAYSASIGGIATLIGTPPNALLAAYLSENQGVSVGFAQWMLLG 236

Query: 216 ILIFIV--------------GILYYGTIGHKLLPESKA-----KAKDFVSDTLKYRTNKM 256
           + + IV              G+   G  G  +  E +A     K +  V+  +   T   
Sbjct: 237 VPVTIVMLVLAWWWLTRRDFGLGNSGDGGKAIRQELEALGTLGKGEKLVA-LVFLVTASA 295

Query: 257 WIATLVFTFVVLMTATGTIPLVTAFMLGACMVVMT---GCITMQEAFNSISWTTIFLFAG 313
           WI   + +  ++   + T   + A +    + V T     +   E    I W  + LF G
Sbjct: 296 WIFRPLLSDRLMPWLSDTGIAIAAAIAMFLIPVNTRNREFLLDWETAKGIPWGVLLLFGG 355

Query: 314 MLPLGSAMAATGAATMIANTVITYVHSPLALLAAAYI-LTALITEVMSNTATAALVMPLG 372
            L +   ++++G A  IA ++      P+ ++    + +   +TEV SNTATAA  +PL 
Sbjct: 356 GLAMAGVISSSGLAEWIAQSLGVAGALPMLVMILLVVGVIIFLTEVTSNTATAAAFLPLL 415

Query: 373 IALADAFDVSAKPILMAIAVAASSCFLTPIATPPNMIILGPGGYSFKDYAKSGWPLEILC 432
            ALA +  VS   + +  A+AAS  F+ P+ATPPN I+   G     D  ++G+ L +L 
Sbjct: 416 GALALSQGVSPLLLTVPAAIAASCAFMMPVATPPNAIVFSSGHMQIGDMIRAGFALNLLG 475

Query: 433 AVV 435
            VV
Sbjct: 476 IVV 478



 Score = 63.9 bits (154), Expect = 1e-14
 Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 11/169 (6%)

Query: 253 TNKMWIATLVFTFVVLMTATGTIPLVTAFMLGACMVVMTGCITMQEAFNSISWTTIFLFA 312
           + + W A  +   +    +T  IP+    +L   +V   G  T+ EA    +   IFLF 
Sbjct: 47  SGQAWSALGLMLLMATWWSTEAIPIPATALLPIVLVPALGLGTVGEATEPYANPIIFLFL 106

Query: 313 GMLPLGSAMAATGAATMIANTVITYVHS-PLALLAAAYILTALITEVMSNTATAALVMPL 371
           G   LG AM        IA   +  V S P   +A   + TA ++  +SNTATA +++P+
Sbjct: 107 GGFTLGLAMQRWNLHRRIALMTLKAVGSKPRRQIAGFMLATAFLSMWVSNTATAIMMLPI 166

Query: 372 GIALADAFDVSAKP---------ILMAIAVAAS-SCFLTPIATPPNMII 410
           G+++    D +  P         +L+AIA +AS     T I TPPN ++
Sbjct: 167 GLSVVAMMDTNDNPEGVRRYATALLLAIAYSASIGGIATLIGTPPNALL 215



 Score = 60.5 bits (145), Expect = 1e-13
 Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 20/222 (9%)

Query: 26  ESADGINSQKAIITLIILGTAAVLFFTEALP------LPVTAMLVPVALSFPGIDILSSS 79
           E+   +   + ++ L+ L TA+   F   L       L  T + +  A++   I + + +
Sbjct: 273 EALGTLGKGEKLVALVFLVTASAWIFRPLLSDRLMPWLSDTGIAIAAAIAMFLIPVNTRN 332

Query: 80  RAFA-DF----GNKW--VVLFMAAFILGEAVFRTGFADKIGQLTVKAAGKSQLKLMLLVM 132
           R F  D+    G  W  ++LF     +   +  +G A+ I Q    A     L ++LLV+
Sbjct: 333 REFLLDWETAKGIPWGVLLLFGGGLAMAGVISSSGLAEWIAQSLGVAGALPMLVMILLVV 392

Query: 133 LAIGTMSAFLSNTGTTAAFIPIVMGICVSASLKPGKLLIPMAYAASLGGTLTLIGTPPNG 192
             I  ++   SNT T AAF+P++  + +S  + P  L +P A AAS    +  + TPPN 
Sbjct: 393 GVIIFLTEVTSNTATAAAFLPLLGALALSQGVSPLLLTVPAAIAASCAFMMP-VATPPNA 451

Query: 193 LVNDALEKSGIAPFGFFEFAKIGILIFIVGILYYGTIGHKLL 234
           +V      SG    G  +  + G  + ++GI+    + + LL
Sbjct: 452 IV----FSSGHMQIG--DMIRAGFALNLLGIVVVTVLSYLLL 487