Pairwise Alignments

Query, 446 a.a., SLC13 family permease from Methanococcus maripaludis S2

Subject, 504 a.a., Na+/dicarboxylate or sulfate symporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  110 bits (274), Expect = 1e-28
 Identities = 114/472 (24%), Positives = 212/472 (44%), Gaps = 46/472 (9%)

Query: 6   ILLVLAVFLIGFTKIAYVDEESADGINS-QKAIITLIILGTAAVLFFTEALPLPVTAMLV 64
           I L +A+ L        +D    +G+   ++ +I++ I  T   +F  EA+P   T++L+
Sbjct: 33  IKLTIAITLSLILWFLPIDTFGIEGLTVIEQRLISIFIFATLMWVF--EAVPAWTTSVLI 90

Query: 65  PVALSFPGID----ILSSSRAFADFG-------------NKWVVLFMAAFILGEAVFRTG 107
            V L     D     L+ +    + G             +  ++LF+  FIL  A  ++G
Sbjct: 91  VVLLLLTVSDSSLWFLTQNTPAEELGQTVKYKSILHCFADPIIMLFIGGFILAIAATKSG 150

Query: 108 FADKIGQLTVKAAGKSQLKLMLLVMLAIGTMSAFLSNTGTTAAFI----PIVMGICVSAS 163
               + ++ ++  G     ++L  +L     S FLSNT T A  +    P++  +     
Sbjct: 151 LDVLLARVMLRPFGTQSRYVLLGFILVTAVFSMFLSNTATAAMMLTFLTPVLKALPADGK 210

Query: 164 LKPGKLLIPMAYAASLGGTLTLIGTPPNGLVNDAL-EKSGI-APFGFFEFAKIGILIFIV 221
            K G L + +  AA++GG  T IGTPPN +    L +  G+    GF E+    +   I+
Sbjct: 211 GKIG-LAMAIPVAANVGGMGTPIGTPPNAIALKYLNDPEGLNLNIGFGEWMSFMLPYTII 269

Query: 222 GILYYGTIGHKLLPESKAKAKDFVSDTLKYRTNKMWIATLVF-TFVVLMTA------TGT 274
            +     I  +L P  +   +  +    K    K W + +V+ TF + +        TG 
Sbjct: 270 VLFIAWFILLRLFPFKQKSIELQIEGEAK----KDWRSIVVYITFAITVLLWMFDKFTGV 325

Query: 275 IPLVTAFMLGACMVVMTGCITMQEAFNSISWTTIFLFAGMLPLGSAMAATGAATMIANTV 334
              V A M+   +  +TG IT ++    ISW+ +++ AG   LG A+  TG A  +   +
Sbjct: 326 NSNVVA-MIPVAVFCITGVITKRD-LEEISWSVLWMVAGGFALGVALQETGLAKHMIEAI 383

Query: 335 ITYVHSPLALLAAAYILTALITEVMSNTATAALVMPL----GIALADAFDV--SAKPILM 388
                 P+ ++  + ++   +   +S+TATAAL++P+    GI++ +        + +L+
Sbjct: 384 PFSTWPPVLMIVGSGLICYAMANFISHTATAALLVPILAIAGISMRENLSSLGGVETLLI 443

Query: 389 AIAVAASSCFLTPIATPPNMIILGPGGYSFKDYAKSGWPLEILCAVVAIAVI 440
            +A+ +S   + PI+TPPN +    G    KD  K G  + I+  ++   ++
Sbjct: 444 GVAIGSSLAMILPISTPPNALAHATGMIQQKDMEKVGIIMGIIGLILGYTML 495